RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 BBS12Q6ZW61 710 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 PTRH1Q86Y79 214 aaKnown RBP6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 KATNAL2Q8IYT4 538 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 GALNT6Q8NCL4 622 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 C9orf43Q8TAL5 461 aaPredicted RBP6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 BRSK1Q8TDC3 778 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 TFB1MQ8WVM0 346 aaKnown RBP6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 APOBEC4Q8WW27 367 aaKnown RBP6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 KIAA1143Q96AT1 154 aaPredicted RBP6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 RNF31Q96EP0 1072 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 ABHD17AQ96GS6 310 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 CCDC42Q96M95 316 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 QKIQ96PU8 341 aaKnown RBP eCLIP6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 OR6C1Q96RD1 312 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 VAT1Q99536 393 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 MAK16Q9BXY0 300 aaKnown RBP6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 ULBP3Q9BZM4 244 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 DEF6Q9H4E7 631 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 AKIRIN1Q9H9L7 192 aaPredicted RBP6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 UGT1A7Q9HAW7 530 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 UGT1A10Q9HAW8 530 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 UGT1A8Q9HAW9 530 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 HACD3Q9P035 362 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 ANAPC2Q9UJX6 822 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 CROTQ9UKG9 612 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 DNMT3AQ9Y6K1 912 aaPredicted RBP6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 SEC16AO15027 2179 aa6.05□□□□□ -1.44
PNKDP1-201ENST00000435914 PRRC2CQ9Y520 2896 aaKnown RBP6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 FER1L5A0AVI2 2057 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 GLYATL1P3A0A0U1RQE8 302 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 MTSS1O43312 755 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 CBFA2T2O43439 604 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 BUD23O43709 281 aaKnown RBP6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 KIAA0754O94854 1291 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 NDUFA10O95299 355 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 PDGFAP04085 211 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 TPM3P06753 285 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 FOLR1P15328 257 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 AMD1P17707 334 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 TCN2P20062 427 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 ADRA1AP35348 466 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 DLSTP36957 453 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 XIAPP98170 497 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 MC1RQ01726 317 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 FOXM1Q08050 763 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 MPP3Q13368 585 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 XRCC4Q13426 336 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 NFE2L1Q14494 772 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 KCNAB1Q14722 419 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 PPP2R5EQ16537 467 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 DEFB109BQ30KR1 87 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 TFDP3Q5H9I0 405 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 LDLRAP1Q5SW96 308 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 CACHD1Q5VU97 1274 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 ZDHHC20Q5W0Z9 365 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 CCDC70Q6NSX1 233 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 PWWP2BQ6NUJ5 590 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 TMEM220Q6QAJ8 160 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 C6orf15Q6UXA7 325 aaPredicted RBP6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 FAM151BQ6UXP7 276 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 FAM92BQ6ZTR7 304 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 BZW1Q7L1Q6 419 aaKnown RBP6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 PID1Q7Z2X4 250 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 TMEM135Q86UB9 458 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 ZC3H18Q86VM9 953 aaKnown RBP6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 AMZ2Q86W34 360 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 TRAPPC5Q8IUR0 188 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 APLFQ8IW19 511 aaPredicted RBP6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 TRIM48Q8IWZ4 208 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 D2HGDHQ8N465 521 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 SLC25A41Q8N5S1 370 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 TC2NQ8N9U0 490 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 UBXN4Q92575 508 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 KRT35Q92764 455 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 CXorf40BQ96DE9 158 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 ZDHHC12Q96GR4 267 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 LINC00615Q96LM1 132 aaPredicted RBP6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 FCRL4Q96PJ5 515 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 RUFY1Q96T51 708 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 INSM2Q96T92 566 aaPredicted RBP6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 MAP3K3Q99759 626 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 C19orf43Q9BQ61 176 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 ZMYND15Q9H091 742 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 C10orf88Q9H8K7 445 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 MLXIPLQ9NP71 852 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 LHX9Q9NQ69 397 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 ZNF71Q9NQZ8 489 aaPredicted RBP6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 ZNHIT6Q9NWK9 470 aaKnown RBP6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 TRIM10Q9UDY6 481 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 TFR2Q9UP52 801 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 KCTD3Q9Y597 815 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 PCSK5Q92824 1860 aa6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 SPTAN1Q13813 2472 aaKnown RBP6.04□□□□□ -1.44
PNKDP1-201ENST00000435914 PIKFYVEQ9Y2I7 2098 aa6.03□□□□□ -1.44
PNKDP1-201ENST00000435914 SHANK1Q9Y566 2161 aa6.03□□□□□ -1.44
PNKDP1-201ENST00000435914 IGLV3-16A0A075B6K0 115 aa6.03□□□□□ -1.44
PNKDP1-201ENST00000435914 RCCD1A6NED2 376 aa6.03□□□□□ -1.44
PNKDP1-201ENST00000435914 OR5K3A6NET4 321 aa6.03□□□□□ -1.44
PNKDP1-201ENST00000435914 MGAT4DA6NG13 374 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms