RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 PCDHGA4Q9Y5G9 962 aa17.55■□□□□ 0.4
CPNE1-213ENST00000434795 AGAP14A8MT82 685 aa17.54■□□□□ 0.4
CPNE1-213ENST00000434795 DDX3YO15523 660 aaKnown RBP17.54■□□□□ 0.4
CPNE1-213ENST00000434795 AMD1P17707 334 aa17.54■□□□□ 0.4
CPNE1-213ENST00000434795 GFERP55789 205 aa17.54■□□□□ 0.4
CPNE1-213ENST00000434795 KIF5AQ12840 1032 aa17.54■□□□□ 0.4
CPNE1-213ENST00000434795 METRNLQ641Q3 311 aa17.54■□□□□ 0.4
CPNE1-213ENST00000434795 FAM83HQ6ZRV2 1179 aaPredicted RBP17.54■□□□□ 0.4
CPNE1-213ENST00000434795 TRIM48Q8IWZ4 208 aa17.54■□□□□ 0.4
CPNE1-213ENST00000434795 RBM12BQ8IXT5 1001 aaKnown RBP17.54■□□□□ 0.4
CPNE1-213ENST00000434795 MED8Q96G25 268 aa17.54■□□□□ 0.4
CPNE1-213ENST00000434795 TEFMQ96QE5 360 aaKnown RBP17.54■□□□□ 0.4
CPNE1-213ENST00000434795 CTRCQ99895 268 aa17.54■□□□□ 0.4
CPNE1-213ENST00000434795 APMAPQ9HDC9 416 aa17.54■□□□□ 0.4
CPNE1-213ENST00000434795 POT1Q9NUX5 634 aa17.54■□□□□ 0.4
CPNE1-213ENST00000434795 IMPACTQ9P2X3 320 aa17.54■□□□□ 0.4
CPNE1-213ENST00000434795 PACSIN2Q9UNF0 486 aaPredicted RBP17.54■□□□□ 0.4
CPNE1-213ENST00000434795 MN1Q10571 1320 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-213ENST00000434795 MACROD2A1Z1Q3 448 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 OR2AG2A6NM03 316 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 TOX3O15405 576 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-213ENST00000434795 CAPN5O15484 640 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-213ENST00000434795 SRP72O76094 671 aaKnown RBP17.53■□□□□ 0.4
CPNE1-213ENST00000434795 STK10O94804 968 aaKnown RBP17.53■□□□□ 0.4
CPNE1-213ENST00000434795 ITGB2P05107 769 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 ANKRD34CP0C6C1 535 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 CYP4F2P78329 520 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 KLF1Q13351 362 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-213ENST00000434795 GPR18Q14330 331 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 SPARCL1Q14515 664 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 RPE65Q16518 533 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 PARP6Q2NL67 630 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 KCTD11Q693B1 232 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 XKR5Q6UX68 686 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 TIPARPQ7Z3E1 657 aaKnown RBP17.53■□□□□ 0.4
CPNE1-213ENST00000434795 ZNF605Q86T29 641 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 SYCE1Q8N0S2 351 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 CXorf40BQ96DE9 158 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 ZNF514Q96K75 400 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-213ENST00000434795 C19orf43Q9BQ61 176 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 ZPBPQ9BS86 351 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 SLC12A9Q9BXP2 914 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 ZCCHC2Q9C0B9 1178 aaKnown RBP17.53■□□□□ 0.4
CPNE1-213ENST00000434795 ZMYND15Q9H091 742 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 ASB8Q9H765 288 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 EPHA6Q9UF33 1036 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 FKBPLQ9UIM3 349 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 SDK2Q58EX2 2172 aa17.53■□□□□ 0.4
CPNE1-213ENST00000434795 MIF4GDA9UHW6 222 aaKnown RBP17.52■□□□□ 0.4
CPNE1-213ENST00000434795 SGTAO43765 313 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 RAD1O60671 282 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 PRAMEF1O95521 474 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 METTL18O95568 372 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 CRTAMO95727 393 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 FTCDO95954 541 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 MSH3P20585 1137 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 CDC25BP30305 580 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 LEPRP48357 1165 aaKnown RBP17.52■□□□□ 0.4
CPNE1-213ENST00000434795 ATP1A2P50993 1020 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 NFE2L1Q14494 772 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 FNBP1LQ5T0N5 605 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 CEACAM20Q6UY09 585 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 CACNA2D3Q8IZS8 1091 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 UBL4BQ8N7F7 174 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 BEND7Q8N7W2 519 aaPredicted RBP17.52■□□□□ 0.4
CPNE1-213ENST00000434795 FAM71DQ8N9W8 422 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 ZSCAN1Q8NBB4 408 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 TTC13Q8NBP0 860 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 OR13C4Q8NGS5 318 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 EXTL1Q92935 676 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 HES6Q96HZ4 224 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 TGM7Q96PF1 710 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 PPP1R2P1Q96PQ5 205 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 TBL1YQ9BQ87 522 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 DESI2Q9BSY9 194 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 RAB33BQ9H082 229 aa17.52■□□□□ 0.4
CPNE1-213ENST00000434795 SIDT1Q9NXL6 827 aaKnown RBP17.52■□□□□ 0.4
CPNE1-213ENST00000434795 R3HDM2Q9Y2K5 976 aaKnown RBP17.52■□□□□ 0.4
CPNE1-213ENST00000434795 TCRBV7S2A1N4TA0A589 114 aa17.51■□□□□ 0.39
CPNE1-213ENST00000434795 MGAT4DA6NG13 374 aa17.51■□□□□ 0.39
CPNE1-213ENST00000434795 POLR1CO15160 346 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-213ENST00000434795 LDB2O43679 373 aa17.51■□□□□ 0.39
CPNE1-213ENST00000434795 KIF1CO43896 1103 aaKnown RBP17.51■□□□□ 0.39
CPNE1-213ENST00000434795 ZNF189O75820 626 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-213ENST00000434795 MAP4P27816 1152 aaKnown RBP17.51■□□□□ 0.39
CPNE1-213ENST00000434795 HALP42357 657 aa17.51■□□□□ 0.39
CPNE1-213ENST00000434795 PDE1BQ01064 536 aa17.51■□□□□ 0.39
CPNE1-213ENST00000434795 TBR1Q16650 682 aa17.51■□□□□ 0.39
CPNE1-213ENST00000434795 LONRF2Q1L5Z9 754 aa17.51■□□□□ 0.39
CPNE1-213ENST00000434795 DET1Q7L5Y6 550 aa17.51■□□□□ 0.39
CPNE1-213ENST00000434795 IL22RA1Q8N6P7 574 aa17.51■□□□□ 0.39
CPNE1-213ENST00000434795 SPC24Q8NBT2 197 aa17.51■□□□□ 0.39
CPNE1-213ENST00000434795 SLC35B2Q8TB61 432 aa17.51■□□□□ 0.39
CPNE1-213ENST00000434795 NAT14Q8WUY8 206 aa17.51■□□□□ 0.39
CPNE1-213ENST00000434795 KLHL6Q8WZ60 621 aa17.51■□□□□ 0.39
CPNE1-213ENST00000434795 RSC1A1Q92681 617 aa17.51■□□□□ 0.39
CPNE1-213ENST00000434795 INSM2Q96T92 566 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-213ENST00000434795 FEZ2Q9UHY8 353 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-213ENST00000434795 PSMD13Q9UNM6 376 aa17.51■□□□□ 0.39
CPNE1-213ENST00000434795 TMEM184BQ9Y519 407 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms