RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 PRICKLE2Q7Z3G6 844 aa14.96□□□□□ -0.01
PTCD1-204ENST00000430982 C17orf82Q86X59 251 aaPredicted RBP14.96□□□□□ -0.01
PTCD1-204ENST00000430982 CCNJLQ8IV13 435 aa14.96□□□□□ -0.01
PTCD1-204ENST00000430982 ZNF547Q8IVP9 402 aa14.96□□□□□ -0.01
PTCD1-204ENST00000430982 EXD3Q8N9H8 876 aa14.96□□□□□ -0.01
PTCD1-204ENST00000430982 PPHLN1Q8NEY8 458 aaKnown RBP14.96□□□□□ -0.01
PTCD1-204ENST00000430982 GRK7Q8WTQ7 553 aa14.96□□□□□ -0.01
PTCD1-204ENST00000430982 GRAMD1AQ96CP6 724 aa14.96□□□□□ -0.01
PTCD1-204ENST00000430982 CDKN2AIPNLQ96HQ2 116 aa14.96□□□□□ -0.01
PTCD1-204ENST00000430982 TIMM29Q9BSF4 260 aa14.96□□□□□ -0.01
PTCD1-204ENST00000430982 TCAF1Q9Y4C2 921 aa14.96□□□□□ -0.01
PTCD1-204ENST00000430982 PCDHGA8Q9Y5G5 932 aa14.96□□□□□ -0.01
PTCD1-204ENST00000430982 DOPEY2Q9Y3R5 2298 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.95□□□□□ -0.02
PTCD1-204ENST00000430982 TCRBV7S3A2A0A539 114 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 PDZK1P1A8MUH7 402 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 H7C0S8 307 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 CASC3O15234 703 aaKnown RBP14.95□□□□□ -0.02
PTCD1-204ENST00000430982 NUDT21O43809 227 aaKnown RBP14.95□□□□□ -0.02
PTCD1-204ENST00000430982 PRSS56P0CW18 603 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 RALBP11234 206 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 SLC2A4P14672 509 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 VCLP18206 1134 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 TPSB2P20231 275 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 PBLDP30039 288 aaPredicted RBP14.95□□□□□ -0.02
PTCD1-204ENST00000430982 CDKN1CP49918 316 aaPredicted RBP14.95□□□□□ -0.02
PTCD1-204ENST00000430982 ARSDP51689 593 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 SPIDRQ14159 915 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 TPSAB1Q15661 275 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 SEPT7Q16181 437 aaKnown RBP14.95□□□□□ -0.02
PTCD1-204ENST00000430982 FNBP1LQ5T0N5 605 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 TSTD2Q5T7W7 516 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 RBM44Q6ZP01 1051 aaKnown RBP14.95□□□□□ -0.02
PTCD1-204ENST00000430982 NXPE1Q8N323 547 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 WDR48Q8TAF3 677 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 SLC37A2Q8TED4 501 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 NAT14Q8WUY8 206 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 CCDC97Q96F63 343 aaPredicted RBP14.95□□□□□ -0.02
PTCD1-204ENST00000430982 GFM1Q96RP9 751 aaKnown RBP14.95□□□□□ -0.02
PTCD1-204ENST00000430982 RANBP9Q96S59 729 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 COPS8Q99627 209 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 DDX47Q9H0S4 455 aaKnown RBP14.95□□□□□ -0.02
PTCD1-204ENST00000430982 LRRN3Q9H3W5 708 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 PRDM8Q9NQV8 689 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 STARD5Q9NSY2 213 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 BFARQ9NZS9 450 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 SLC2A6Q9UGQ3 507 aa14.95□□□□□ -0.02
PTCD1-204ENST00000430982 CCDC162PA2VCL2 907 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 OR51F1A6NGY5 319 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 CFAP99D6REC4 459 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 AP3B1O00203 1094 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 POP7O75817 140 aaKnown RBP14.94□□□□□ -0.02
PTCD1-204ENST00000430982 PNLIPP16233 465 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 ALDH4A1P30038 563 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 MLLT3P42568 568 aaPredicted RBP14.94□□□□□ -0.02
PTCD1-204ENST00000430982 CLCNKAP51800 687 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 CRADDP78560 199 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 CDK16Q00536 496 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 CACNG1Q06432 222 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 CLN3Q13286 438 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 KCNJ11Q14654 390 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 PPP1R7Q15435 360 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 AMZ1Q400G9 498 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 GPR33Q49SQ1 333 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 PCID2Q5JVF3 399 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 LRRC8BQ6P9F7 803 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 IYDQ6PHW0 289 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 NLRP9Q7RTR0 991 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 SPRED1Q7Z699 444 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 CLEC14AQ86T13 490 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 AMZ2Q86W34 360 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 SERPINA9Q86WD7 417 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 CREG2Q8IUH2 290 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 SFRP1Q8N474 314 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 BEND7Q8N7W2 519 aaPredicted RBP14.94□□□□□ -0.02
PTCD1-204ENST00000430982 HDAC10Q969S8 669 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 SGF29Q96ES7 293 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 TRIM4Q9C037 500 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 STN1Q9H668 368 aaKnown RBP14.94□□□□□ -0.02
PTCD1-204ENST00000430982 KCND1Q9NSA2 647 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 ZDHHC3Q9NYG2 299 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 SATB2Q9UPW6 733 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 LRRK2Q5S007 2527 aa14.94□□□□□ -0.02
PTCD1-204ENST00000430982 A0A1W2PQM1 296 aa14.93□□□□□ -0.02
PTCD1-204ENST00000430982 AGAP14A8MT82 685 aa14.93□□□□□ -0.02
PTCD1-204ENST00000430982 NTN3O00634 580 aaPredicted RBP14.93□□□□□ -0.02
PTCD1-204ENST00000430982 PPM1DO15297 605 aa14.93□□□□□ -0.02
PTCD1-204ENST00000430982 TCEA3O75764 348 aa14.93□□□□□ -0.02
PTCD1-204ENST00000430982 NTRK1P04629 796 aa14.93□□□□□ -0.02
PTCD1-204ENST00000430982 F3P13726 295 aa14.93□□□□□ -0.02
PTCD1-204ENST00000430982 IDSP22304 550 aa14.93□□□□□ -0.02
PTCD1-204ENST00000430982 PSMA3P25788 255 aa14.93□□□□□ -0.02
PTCD1-204ENST00000430982 ACRV1P26436 265 aa14.93□□□□□ -0.02
PTCD1-204ENST00000430982 MGAT1P26572 445 aa14.93□□□□□ -0.02
PTCD1-204ENST00000430982 PAFAH1B1P43034 410 aa14.93□□□□□ -0.02
PTCD1-204ENST00000430982 NPY2RP49146 381 aa14.93□□□□□ -0.02
PTCD1-204ENST00000430982 PPM1FP49593 454 aaPredicted RBP14.93□□□□□ -0.02
PTCD1-204ENST00000430982 OR1D5P58170 312 aa14.93□□□□□ -0.02
PTCD1-204ENST00000430982 SARNPP82979 210 aaKnown RBP14.93□□□□□ -0.02
PTCD1-204ENST00000430982 B4GALNT1Q00973 533 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms