RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 GLIS1Q8NBF1 620 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 CXorf40BQ96DE9 158 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 SGF29Q96ES7 293 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 PBKQ96KB5 322 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 CCDC74BQ96LY2 380 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 RANBP9Q96S59 729 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 DPH1Q9BZG8 443 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 B3GNT4Q9C0J1 378 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 EIF2B3Q9NR50 452 aaKnown RBP9.64□□□□□ -0.87
HDAC6-207ENST00000430858 PIH1D1Q9NWS0 290 aaKnown RBP9.64□□□□□ -0.87
HDAC6-207ENST00000430858 ZDHHC3Q9NYG2 299 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 ZNF624Q9P2J8 865 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-207ENST00000430858 PDP2Q9P2J9 529 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 PISDQ9UG56 409 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 LHX6Q9UPM6 363 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 URB1O60287 2271 aaKnown RBP9.64□□□□□ -0.87
HDAC6-207ENST00000430858 IGLV3-16A0A075B6K0 115 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 TRBV5-4A0A0C4DH59 114 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 OR52A4PA6NMU1 304 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 CCL22O00626 93 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 NVLO15381 856 aaKnown RBP9.63□□□□□ -0.87
HDAC6-207ENST00000430858 KIF5CO60282 957 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 ATP1B2P14415 290 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-207ENST00000430858 ITIH1P19827 911 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 ADRA1DP25100 572 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 ACRV1P26436 265 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 CSTF2P33240 577 aaKnown RBP eCLIP9.63□□□□□ -0.87
HDAC6-207ENST00000430858 KCNJ1P48048 391 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 PRLHRP49683 370 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 BASP1P80723 227 aaKnown RBP9.63□□□□□ -0.87
HDAC6-207ENST00000430858 CCDC173Q0VFZ6 552 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 NFE2L1Q14494 772 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 CLCA4Q14CN2 919 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 C16orf72Q14CZ0 275 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 METRNLQ641Q3 311 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 NLRP9Q7RTR0 991 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 PLXDC1Q8IUK5 500 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 SPACA3Q8IXA5 215 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 PRELID2Q8N945 189 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 AGBL5Q8NDL9 886 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 RCBTB1Q8NDN9 531 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 OR2L2Q8NH16 312 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 KCNE4Q8WWG9 221 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 NCSTNQ92542 709 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 PEX13Q92968 403 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 NAF1Q96HR8 494 aaKnown RBP9.63□□□□□ -0.87
HDAC6-207ENST00000430858 NAP1L3Q99457 506 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-207ENST00000430858 TBC1D10AQ9BXI6 508 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 KCNF1Q9H3M0 494 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 FAM96AQ9H5X1 160 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 VPS37BQ9H9H4 285 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 SLC40A1Q9NP59 571 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 CASS4Q9NQ75 786 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 TMEM9Q9P0T7 183 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 ACSL6Q9UKU0 697 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 ACSL5Q9ULC5 683 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 RIMKLBQ9ULI2 386 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 TTC7AQ9ULT0 858 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-207ENST00000430858 WDR37Q9Y2I8 494 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 UNC13CQ8NB66 2214 aa9.63□□□□□ -0.87
HDAC6-207ENST00000430858 C17orf113A0A1B0GUU1 675 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 SGTAO43765 313 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 UBXN7O94888 489 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 GSTM1P09488 218 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 AMD1P17707 334 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 MPSTP25325 297 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 ITPKBP27987 946 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 PBLDP30039 288 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-207ENST00000430858 SLC5A2P31639 672 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 GRIA1P42261 906 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 MAPK9P45984 424 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 CDKN1CP49918 316 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-207ENST00000430858 MAPK10P53779 464 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 UCNP55089 124 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 CDK16Q00536 496 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 GSTM4Q03013 218 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 TLE3Q04726 772 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 ITIH4Q14624 930 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 RPE65Q16518 533 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 CCDC38Q502W7 563 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 TSTD2Q5T7W7 516 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 TMEM164Q5U3C3 297 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 BROXQ5VW32 411 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 AFTPHQ6ULP2 937 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 FAM83HQ6ZRV2 1179 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-207ENST00000430858 TAS2R42Q7RTR8 314 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 SERPINA9Q86WD7 417 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 JAMLQ86YT9 394 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 SLC35F6Q8N357 371 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 OR13J1Q8NGT2 312 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 HM13Q8TCT9 377 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.62□□□□□ -0.87
HDAC6-207ENST00000430858 SGSM3Q96HU1 749 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 PDLIM2Q96JY6 352 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 TTC1Q99614 292 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 CCM2Q9BSQ5 444 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 PSMD13Q9UNM6 376 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 TCAF1Q9Y4C2 921 aa9.62□□□□□ -0.87
HDAC6-207ENST00000430858 KMT2BQ9UMN6 2715 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-207ENST00000430858 MN1Q10571 1320 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms