RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 CLUHO75153 1309 aa16.31■□□□□ 0.2
RIF1-204ENST00000430328 TEX13DA0A0J9YY54 714 aaPredicted RBP16.31■□□□□ 0.2
RIF1-204ENST00000430328 HSPA12AO43301 675 aa16.31■□□□□ 0.2
RIF1-204ENST00000430328 PLATP00750 562 aa16.31■□□□□ 0.2
RIF1-204ENST00000430328 PDYNP01213 254 aa16.31■□□□□ 0.2
RIF1-204ENST00000430328 VTNP04004 478 aa16.31■□□□□ 0.2
RIF1-204ENST00000430328 RBL1P28749 1068 aa16.31■□□□□ 0.2
RIF1-204ENST00000430328 PSMA6P60900 246 aaKnown RBP16.31■□□□□ 0.2
RIF1-204ENST00000430328 RAD9AQ99638 391 aa16.31■□□□□ 0.2
RIF1-204ENST00000430328 FARSBQ9NSD9 589 aaKnown RBP16.31■□□□□ 0.2
RIF1-204ENST00000430328 HNRNPLP14866 589 aaKnown RBP eCLIP16.3■□□□□ 0.21e-8■■■■□ 26.6
RIF1-204ENST00000430328 ZNF132P52740 706 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 HERV-K104P61576 105 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 BCL2A1Q16548 175 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 TBRG1Q3YBR2 411 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 SH3D19Q5HYK7 790 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 AKR1C8PQ5T2L2 129 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 CEP97Q8IW35 865 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 PHTF2Q8N3S3 785 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 METTL21AQ8WXB1 218 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 MFSD14AQ96MC6 490 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 MFSD1Q9H3U5 465 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 CD93Q9NPY3 652 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 SMPD4Q9NXE4 827 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 GAKO14976 1311 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 HHLA1C9JL84 531 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 YAP1P46937 504 aaKnown RBP16.3■□□□□ 0.2
RIF1-204ENST00000430328 ACBD4Q8NC06 268 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 MFSD3Q96ES6 412 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 TXN2Q99757 166 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 FEM1AQ9BSK4 669 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 TRMOQ9BU70 441 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 RANBP3Q9H6Z4 567 aaPredicted RBP16.3■□□□□ 0.2
RIF1-204ENST00000430328 RNF121Q9H920 327 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 KCTD5Q9NXV2 234 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 ZNF175Q9Y473 711 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 MAP4K5Q9Y4K4 846 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 PALLDQ8WX93 1383 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 LGR5O75473 907 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 KIR3DL1P43629 444 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 GABRB2P47870 512 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 SF1Q15637 639 aaKnown RBP16.3■□□□□ 0.2
RIF1-204ENST00000430328 C16orf59Q7L2K0 433 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 FAM83DQ9H4H8 585 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 A0A1W2PRQ8 180 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 ACOX3O15254 700 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 SCGB2A1O75556 95 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 IL12BP29460 328 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 FBXL3Q9UKT7 428 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 GPR89AB7ZAQ6 455 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 GPR89BP0CG08 455 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 NT5EP21589 574 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 SLC15A1P46059 708 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 GNMTQ14749 295 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 METTL3Q86U44 580 aaKnown RBP16.3■□□□□ 0.2
RIF1-204ENST00000430328 CAND1Q86VP6 1230 aaKnown RBP16.3■□□□□ 0.2
RIF1-204ENST00000430328 ARHGAP12Q8IWW6 846 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 SLC22A15Q8IZD6 547 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 ASF1AQ9Y294 204 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 ATF5Q9Y2D1 282 aaPredicted RBP16.3■□□□□ 0.2
RIF1-204ENST00000430328 ABCA10Q8WWZ4 1543 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 ZNF99A8MXY4 864 aaPredicted RBP16.3■□□□□ 0.2
RIF1-204ENST00000430328 GLDCP23378 1020 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 ZNF155Q12901 538 aaPredicted RBP16.3■□□□□ 0.2
RIF1-204ENST00000430328 DUSP4Q13115 394 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 DNAJB7Q7Z6W7 309 aaPredicted RBP16.3■□□□□ 0.2
RIF1-204ENST00000430328 GPR135Q8IZ08 494 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 DNAJB3Q8WWF6 145 aa16.3■□□□□ 0.2
RIF1-204ENST00000430328 ATP10AO60312 1499 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 CRADDP78560 199 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 PLEKHN1Q494U1 663 aaPredicted RBP16.29■□□□□ 0.2
RIF1-204ENST00000430328 HFE2Q6ZVN8 426 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 RALGPS2Q86X27 583 aaPredicted RBP16.29■□□□□ 0.2
RIF1-204ENST00000430328 CENPNQ96H22 339 aaPredicted RBP16.29■□□□□ 0.2
RIF1-204ENST00000430328 PXMP2Q9NR77 195 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 TAS2R1Q9NYW7 299 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 HCN3Q9P1Z3 774 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 VSTM5A8MXK1 200 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 C1QTNF3-AMACRE9PGA6 284 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 RASGRP1O95267 797 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 CLCN7P51798 805 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 C17orf64Q86WR6 236 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 KLHL36Q8N4N3 616 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 CPT1CQ8TCG5 803 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 ZNF606Q8WXB4 792 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 ALG2Q9H553 416 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 COPS7AQ9UBW8 275 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 SCP2D1Q9UJQ7 156 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 RIMKLBQ9ULI2 386 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 ZDHHC9Q9Y397 364 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 POLR1AO95602 1720 aaPredicted RBP16.29■□□□□ 0.2
RIF1-204ENST00000430328 FAM205CA6NFA0 338 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 GPR158Q5T848 1215 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 KCTD9Q7L273 389 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 RBFAQ8N0V3 343 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 UNKLQ9H9P5 680 aaKnown RBP16.29■□□□□ 0.2
RIF1-204ENST00000430328 LRTM1Q9HBL6 345 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 UGT1A9O60656 530 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 USP17L7P0C7H9 530 aa16.29■□□□□ 0.2
RIF1-204ENST00000430328 CCNB1P14635 433 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms