RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 CDC14AQ9UNH5 594 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 CFL2Q9Y281 166 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 WBP11Q9Y2W2 641 aaKnown RBP6.96□□□□□ -1.3
CPS1-203ENST00000430249 ZFP37Q9Y6Q3 630 aaPredicted RBP6.96□□□□□ -1.3
CPS1-203ENST00000430249 PHLPP1O60346 1717 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 TLX3O43711 291 aaPredicted RBP6.96□□□□□ -1.3
CPS1-203ENST00000430249 KRT36O76013 467 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 AP2A2O94973 939 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 PGK1P00558 417 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 MAGEA11P43364 429 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 ATP12AP54707 1039 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 FNBP1LQ5T0N5 605 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 CERCAMQ5T4B2 595 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 BRAT1Q6PJG6 821 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 ABHD13Q7L211 337 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 ADGRD2Q7Z7M1 963 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 ALYREFQ86V81 257 aaKnown RBP6.96□□□□□ -1.3
CPS1-203ENST00000430249 PACS2Q86VP3 889 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 IRF2BP1Q8IU81 584 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 ZNF513Q8N8E2 541 aaPredicted RBP6.96□□□□□ -1.3
CPS1-203ENST00000430249 BANPQ8N9N5 519 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 ZNF563Q8TA94 476 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 SNIP1Q8TAD8 396 aaKnown RBP6.96□□□□□ -1.3
CPS1-203ENST00000430249 UBASH3BQ8TF42 649 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 PEX13Q92968 403 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 RAD51AP1Q96B01 352 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 ZBED6CLQ96FA7 236 aaPredicted RBP6.96□□□□□ -1.3
CPS1-203ENST00000430249 CCM2Q9BSQ5 444 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 ZSCAN5AQ9BUG6 496 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 RHBGQ9H310 441 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 TLE6Q9H808 572 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 FANCFQ9NPI8 374 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 PIH1D1Q9NWS0 290 aaKnown RBP6.96□□□□□ -1.3
CPS1-203ENST00000430249 DNAJB9Q9UBS3 223 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 GTF2IRD1Q9UHL9 959 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 SLC30A4O14863 429 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 PAPSS2O95340 614 aaPredicted RBP6.96□□□□□ -1.3
CPS1-203ENST00000430249 PRAMEF1O95521 474 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 GIMD1P0DJR0 217 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 KCNE1P15382 129 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 CTPS1P17812 591 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 EPHA3P29320 983 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 MYBPC1Q00872 1141 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 ZNF155Q12901 538 aaPredicted RBP6.96□□□□□ -1.3
CPS1-203ENST00000430249 MYBPC3Q14896 1274 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 TAF5Q15542 800 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 NRF1Q16656 503 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 LLGL2Q6P1M3 1020 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 RHBDF2Q6PJF5 856 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 CNSTQ6PJW8 725 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 TAC4Q86UU9 113 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 AHI1Q8N157 1196 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 SLC43A3Q8NBI5 491 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 OR52K2Q8NGK3 314 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 GIPC3Q8TF64 312 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 SUSD3Q96L08 255 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 IPPKQ9H8X2 491 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.96□□□□□ -1.3
CPS1-203ENST00000430249 GDAP2Q9NXN4 497 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 TUBA8Q9NY65 449 aaPredicted RBP6.96□□□□□ -1.3
CPS1-203ENST00000430249 MAT2BQ9NZL9 334 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 CIDEBQ9UHD4 219 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 SLC27A5Q9Y2P5 690 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 DHRS7Q9Y394 339 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 LTN1O94822 1766 aa6.96□□□□□ -1.3
CPS1-203ENST00000430249 MAGEB17A8MXT2 336 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 PDPK1O15530 556 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 SSNA1O43805 119 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 RAP2AP10114 183 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 GNAZP19086 355 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 BRCC3P46736 316 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 RPIAP49247 311 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 PRKAG1P54619 331 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 CRADDP78560 199 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 VARS2Q5ST30 1063 aaKnown RBP6.95□□□□□ -1.3
CPS1-203ENST00000430249 CNKSR3Q6P9H4 555 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 TIFABQ6ZNK6 161 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 ADGRG6Q86SQ4 1221 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 CYP2S1Q96SQ9 504 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 TAPBPLQ9BX59 468 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 TM6SF2Q9BZW4 377 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 ALG2Q9H553 416 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 MKS1Q9NXB0 559 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 GNEQ9Y223 722 aaKnown RBP6.95□□□□□ -1.3
CPS1-203ENST00000430249 FADS3Q9Y5Q0 445 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 ARHGEF33A8MVX0 844 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 STX16-NPEPL1H3BU86 382 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 STX16O14662 325 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 GOT2P00505 430 aaKnown RBP6.95□□□□□ -1.3
CPS1-203ENST00000430249 ANXA4P09525 319 aaPredicted RBP6.95□□□□□ -1.3
CPS1-203ENST00000430249 ANXA8P13928 327 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 CCR10P46092 362 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 RPS9P46781 194 aaKnown RBP6.95□□□□□ -1.3
CPS1-203ENST00000430249 FLT3LGP49771 235 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 MVKQ03426 396 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 GRSF1Q12849 480 aaKnown RBP eCLIP6.95□□□□□ -1.3
CPS1-203ENST00000430249 C9orf64Q5T6V5 341 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 PDE12Q6L8Q7 609 aaKnown RBP6.95□□□□□ -1.3
CPS1-203ENST00000430249 SERPINA9Q86WD7 417 aa6.95□□□□□ -1.3
CPS1-203ENST00000430249 UBR7Q8N806 425 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms