RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 TFDP3Q5H9I0 405 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 SIRPB2Q5JXA9 342 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 FAM182AQ5T1J6 154 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 B4GALNT4Q76KP1 1039 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 BPHLQ86WA6 291 aaPredicted RBP14.6□□□□□ -0.07
MSH5-208ENST00000429846 KMT5CQ86Y97 462 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 CNGA4Q8IV77 575 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 GALNT6Q8NCL4 622 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 SEC14L1Q92503 715 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 SLC41A2Q96JW4 573 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 ZNF514Q96K75 400 aaPredicted RBP14.6□□□□□ -0.07
MSH5-208ENST00000429846 ZNF71Q9NQZ8 489 aaPredicted RBP14.6□□□□□ -0.07
MSH5-208ENST00000429846 LNPEPQ9UIQ6 1025 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 WDR37Q9Y2I8 494 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 PKP3Q9Y446 797 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 MRPS18BQ9Y676 258 aaKnown RBP14.6□□□□□ -0.07
MSH5-208ENST00000429846 KCNMB2Q9Y691 235 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 HACD1B0YJ81 288 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 C21orf140B9A014 251 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 MKRN2OSH3BPM6 223 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 KIF1CO43896 1103 aaKnown RBP14.59□□□□□ -0.07
MSH5-208ENST00000429846 SPAG6O75602 509 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 TNNT1P13805 278 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 PECAM1P16284 738 aaPredicted RBP14.59□□□□□ -0.07
MSH5-208ENST00000429846 HADHBP55084 474 aaKnown RBP14.59□□□□□ -0.07
MSH5-208ENST00000429846 FOXK1P85037 733 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 TUBB3Q13509 450 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 PPP2R5EQ16537 467 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 ATP1A1-AS1Q5TC04 95 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 KAZNQ674X7 775 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 FAM151BQ6UXP7 276 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 SPOCD1Q6ZMY3 1216 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 FAM92BQ6ZTR7 304 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 BLOC1S5Q8TDH9 187 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 MRGPRX2Q96LB1 330 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 CD180Q99467 661 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 FSD1LQ9BXM9 530 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 SAE1Q9UBE0 346 aaPredicted RBP14.59□□□□□ -0.07
MSH5-208ENST00000429846 TRIM10Q9UDY6 481 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 TRHDEQ9UKU6 1024 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 RARRES3Q9UL19 164 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 PADI1Q9ULC6 663 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 DOPEY2Q9Y3R5 2298 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 NBASA2RRP1 2371 aa14.59□□□□□ -0.07
MSH5-208ENST00000429846 POP7O75817 140 aaKnown RBP14.58□□□□□ -0.08
MSH5-208ENST00000429846 CTSCP53634 463 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 ACY1Q03154 408 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 PLCL1Q15111 1095 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 NOMO1Q15155 1222 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 CHRNA6Q15825 494 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 LONRF2Q1L5Z9 754 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 GPRC6AQ5T6X5 926 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 TCTN3Q6NUS6 607 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 PID1Q7Z2X4 250 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 ZC3H18Q86VM9 953 aaKnown RBP14.58□□□□□ -0.08
MSH5-208ENST00000429846 KATNAL2Q8IYT4 538 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 ZNF567Q8N184 647 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 CARFQ8N187 725 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 SLC25A41Q8N5S1 370 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 RASGEF1AQ8N9B8 481 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 SIDT2Q8NBJ9 832 aaKnown RBP14.58□□□□□ -0.08
MSH5-208ENST00000429846 GPR150Q8NGU9 434 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 ZFPM2Q8WW38 1151 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 OXNAD1Q96HP4 312 aaPredicted RBP14.58□□□□□ -0.08
MSH5-208ENST00000429846 QKIQ96PU8 341 aaKnown RBP eCLIP14.58□□□□□ -0.08
MSH5-208ENST00000429846 LHX9Q9NQ69 397 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.58□□□□□ -0.08
MSH5-208ENST00000429846 HYOU1Q9Y4L1 999 aa14.58□□□□□ -0.08
MSH5-208ENST00000429846 FLNCQ14315 2725 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 hCG_1818297A0A087WSY0 165 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 IGHV5-51A0A0C4DH38 117 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 TLCD2A6NGC4 264 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 OR2AG2A6NM03 316 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 GAPDHSO14556 408 aaPredicted RBP14.57□□□□□ -0.08
MSH5-208ENST00000429846 CREG1O75629 220 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 RFPL1O75677 317 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 ZRANB2O95218 330 aaKnown RBP eCLIP14.57□□□□□ -0.08
MSH5-208ENST00000429846 PYGMP11217 842 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 MTHFD1P11586 935 aaKnown RBP14.57□□□□□ -0.08
MSH5-208ENST00000429846 CHRNA4P43681 627 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 PMS2P54278 862 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 KLRB1Q12918 225 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 DNASE1L3Q13609 305 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 ERV3-1Q14264 604 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 NFE2L1Q14494 772 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 RPE65Q16518 533 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 COLEC12Q5KU26 742 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 TMEM220Q6QAJ8 160 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 BEND7Q8N7W2 519 aaPredicted RBP14.57□□□□□ -0.08
MSH5-208ENST00000429846 IPMKQ8NFU5 416 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 RBM41Q96IZ5 413 aaKnown RBP14.57□□□□□ -0.08
MSH5-208ENST00000429846 ELMO2Q96JJ3 720 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 FERMT1Q9BQL6 677 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 RSPH14Q9UHP6 348 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 TP53TG5Q9Y2B4 290 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 ALG6Q9Y672 507 aa14.57□□□□□ -0.08
MSH5-208ENST00000429846 LRRK2Q5S007 2527 aa14.56□□□□□ -0.08
MSH5-208ENST00000429846 OR5K3A6NET4 321 aa14.56□□□□□ -0.08
MSH5-208ENST00000429846 MGAT4DA6NG13 374 aa14.56□□□□□ -0.08
MSH5-208ENST00000429846 APOC4-APOC2K7ER74 178 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms