RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SBSNQ6UWP8 590 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 CYP2R1Q6VVX0 501 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 MACC1Q6ZN28 852 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 GOLGA7Q7Z5G4 137 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 SLC15A3Q8IY34 581 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 FNDC5Q8NAU1 212 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 OR2AP1Q8NGE2 309 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 LYSMD1Q96S90 227 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 CRISPLD2Q9H0B8 497 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 NOL11Q9H8H0 719 aaKnown RBP13.5□□□□□ -0.25
THBS3-202ENST00000428962 CNOT6Q9ULM6 557 aaKnown RBP13.5□□□□□ -0.25
THBS3-202ENST00000428962 ATP11BQ9Y2G3 1177 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 BRCA2P51587 3418 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 SCN8AQ9UQD0 1980 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 FXYD1O00168 92 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 GAPDHSO14556 408 aaPredicted RBP13.5□□□□□ -0.25
THBS3-202ENST00000428962 GPR39O43194 453 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 SYNCRIPO60506 623 aaKnown RBP13.5□□□□□ -0.25
THBS3-202ENST00000428962 NPPAP01160 153 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 CA8P35219 290 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 HNF1BP35680 557 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 POLR2JP52435 117 aaKnown RBP13.5□□□□□ -0.25
THBS3-202ENST00000428962 ERVPABLB-1P60509 514 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 DEFB103AP81534 67 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 LCN8Q6JVE9 175 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 METTL2BQ6P1Q9 378 aaKnown RBP13.5□□□□□ -0.25
THBS3-202ENST00000428962 PRR23BQ6ZRT6 265 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 TPGS1Q6ZTW0 290 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 GAREM2Q75VX8 874 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 BBS7Q8IWZ6 715 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 FIBCD1Q8N539 461 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 ZBTB2Q8N680 514 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 METTL6Q8TCB7 284 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 IL26Q9NPH9 171 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 SLC52A3Q9NQ40 469 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 HEBP1Q9NRV9 189 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 ACTR3BQ9P1U1 418 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 SNX13Q9Y5W8 968 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 ZNF839A8K0R7 811 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 IFRD1O00458 451 aaPredicted RBP13.49□□□□□ -0.25
THBS3-202ENST00000428962 BAIAP3O94812 1187 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 TNFAIP8O95379 198 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 CLDN7O95471 211 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 CLTBP09497 229 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 BPIP17213 487 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 MSH3P20585 1137 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 SLC6A2P23975 617 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 PSMA4P25789 261 aaKnown RBP13.49□□□□□ -0.25
THBS3-202ENST00000428962 HMOX2P30519 316 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 GRIA3P42263 894 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 CDKN3Q16667 212 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 C6orf136Q5SQH8 315 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 PRPF38BQ5VTL8 546 aaKnown RBP13.49□□□□□ -0.25
THBS3-202ENST00000428962 LETMD1Q6P1Q0 360 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 USP45Q70EL2 814 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 UBE2Q1Q7Z7E8 422 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 TMC8Q8IU68 726 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 AHI1Q8N157 1196 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 GALNT4Q8N4A0 578 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 TMEM199Q8N511 208 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 OR52B6Q8NGF0 335 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 OR2T11Q8NH01 316 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 LRTOMTQ8WZ04 291 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 ESAMQ96AP7 390 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 ISG20Q96AZ6 181 aaKnown RBP13.49□□□□□ -0.25
THBS3-202ENST00000428962 SLCO4A1Q96BD0 722 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 PPWD1Q96BP3 646 aaKnown RBP13.49□□□□□ -0.25
THBS3-202ENST00000428962 VWCEQ96DN2 955 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 YME1L1Q96TA2 773 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 PTBP2Q9UKA9 531 aaKnown RBP13.49□□□□□ -0.25
THBS3-202ENST00000428962 ASB1Q9Y576 335 aa13.49□□□□□ -0.25
THBS3-202ENST00000428962 HNRNPRO43390 633 aaKnown RBP13.48□□□□□ -0.25
THBS3-202ENST00000428962 TGM5O43548 720 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 LILRB3O75022 631 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 SLC25A14O95258 325 aaPredicted RBP13.48□□□□□ -0.25
THBS3-202ENST00000428962 TRIM16O95361 564 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 CAPN1P07384 714 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 CBSLP0DN79 551 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 CTSAP10619 480 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 ATP6V1B2P21281 511 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 IL10P22301 178 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 CBSP35520 551 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 WDR5P61964 334 aaKnown RBP13.48□□□□□ -0.25
THBS3-202ENST00000428962 PRKG2Q13237 762 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 CAPRIN1Q14444 709 aaKnown RBP13.48□□□□□ -0.25
THBS3-202ENST00000428962 AASDHQ4L235 1098 aaPredicted RBP13.48□□□□□ -0.25
THBS3-202ENST00000428962 LIN52Q52LA3 116 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 PITRM1Q5JRX3 1037 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 ZDHHC20Q5W0Z9 365 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 SULT1C3Q6IMI6 304 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 IL27RAQ6UWB1 636 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 RNF165Q6ZSG1 346 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 TMCO2Q7Z6W1 182 aaPredicted RBP13.48□□□□□ -0.25
THBS3-202ENST00000428962 NXPE1Q8N323 547 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 ANKFN1Q8N957 763 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 PHC3Q8NDX5 983 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 UBTD2Q8WUN7 234 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 ZNF597Q96LX8 424 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 ACOX2Q99424 681 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 EGFL8Q99944 293 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms