RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 NT5DC3Q86UY8 548 aa17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 TMEM126BQ8IUX1 230 aa17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 IMP4Q96G21 291 aaKnown RBP17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 AGAP3Q96P47 875 aa17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 VPS35Q96QK1 796 aa17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 BPIFA1Q9NP55 256 aa17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 PSMD13Q9UNM6 376 aa17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 ZNF451Q9Y4E5 1061 aa17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 HEY1Q9Y5J3 304 aa17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 BZW2Q9Y6E2 419 aaKnown RBP17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 SEC16AO15027 2179 aa17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 UBA6A0AVT1 1052 aaPredicted RBP17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 TLCD2A6NGC4 264 aa17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 SCRG1O75711 98 aa17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 TAS2R40P59535 323 aa17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 HSD11B2P80365 405 aa17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 AP1B1Q10567 949 aa17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 MRPL49Q13405 166 aaKnown RBP17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 LAMB3Q13751 1172 aa17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 RPE65Q16518 533 aa17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 EIF2S3LQ2VIR3 472 aaKnown RBP17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 ANO6Q4KMQ2 910 aa17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 PAPD7Q5XG87 772 aaKnown RBP17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 AMZ2Q86W34 360 aa17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 KMT5CQ86Y97 462 aa17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 NAP1L5Q96NT1 182 aaPredicted RBP17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 MFRPQ9BY79 579 aa17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 CBX8Q9HC52 389 aa17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 SLAMF7Q9NQ25 335 aa17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 G3BP2Q9UN86 482 aaKnown RBP17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 SPO11Q9Y5K1 396 aa17.91■□□□□ 0.46
UPK3BP1-201ENST00000428678 A0A087X0T9 212 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 A0A1B0GTH6 734 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 TCP11X1B4DZS4 312 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 AURKAO14965 403 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 DPM1O60762 260 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 PROSCO94903 275 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 FAM228BP0C875 321 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 TUBB4BP68371 445 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 GPS2Q13227 327 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 TUBB2AQ13885 445 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 GPR19Q15760 415 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 CCDC70Q6NSX1 233 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 JMJD6Q6NYC1 403 aaPredicted RBP17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 RNF157Q96PX1 679 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 CD180Q99467 661 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 TUBB2BQ9BVA1 445 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 SLC29A3Q9BZD2 475 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 SLC25A51Q9H1U9 297 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 CHST8Q9H2A9 424 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 IMP3Q9NV31 184 aaKnown RBP17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 CTTNBP2NLQ9P2B4 639 aa17.9■□□□□ 0.46
UPK3BP1-201ENST00000428678 SMTNL1A8MU46 457 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 KCNJ13O60928 360 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 POP7O75817 140 aaKnown RBP17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 NDST3O95803 873 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 DDAH2O95865 285 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 SERPING1P05155 500 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 KLK3P07288 261 aaPredicted RBP17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 LPOP22079 712 aaPredicted RBP17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 ALKBH5Q6P6C2 394 aaKnown RBP17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 FAM83HQ6ZRV2 1179 aaPredicted RBP17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 D2HGDHQ8N465 521 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 PLD5Q8N7P1 536 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 SPATA22Q8NHS9 363 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 PRR7Q8TB68 274 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 BRSK1Q8TDC3 778 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 RAPGEF5Q92565 580 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 SRPK1Q96SB4 655 aaKnown RBP17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 ZCCHC2Q9C0B9 1178 aaKnown RBP17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 KCND1Q9NSA2 647 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 HRASLS2Q9NWW9 162 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 SOHLH2Q9NX45 425 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 SNX7Q9UNH6 387 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 PCDHGB7Q9Y5F8 929 aa17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 CFAP20Q9Y6A4 193 aaKnown RBP17.89■□□□□ 0.45
UPK3BP1-201ENST00000428678 OR5K3A6NET4 321 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 ENO4A6NNW6 628 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 PMPCBO75439 489 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 MT-CYBP00156 380 aaPredicted RBP17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 KDELR1P24390 212 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 PBLDP30039 288 aaPredicted RBP17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 DMPKQ09013 629 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 XRCC4Q13426 336 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 FIGNQ5HY92 759 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 TMTC4Q5T4D3 741 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 IZUMO3Q5VZ72 239 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 ZNF787Q6DD87 383 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 ARMC6Q6NXE6 501 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 OOSP2Q86WS3 158 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 ENDOVQ8N8Q3 282 aaKnown RBP17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 RASGEF1AQ8N9B8 481 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 Q8NA96 180 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 SLC38A9Q8NBW4 561 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 FDCSPQ8NFU4 85 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 OR8K5Q8NH50 307 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 ZNF501Q96CX3 271 aaPredicted RBP17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 BPIFA3Q9BQP9 254 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 XPO4Q9C0E2 1151 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms