RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 FAM83HQ6ZRV2 1179 aaPredicted RBP18.07■□□□□ 0.48
PSPC1-202ENST00000427943 AMZ2Q86W34 360 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 SYCE1Q8N0S2 351 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 ZNF843Q8N446 348 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 BEND7Q8N7W2 519 aaPredicted RBP18.07■□□□□ 0.48
PSPC1-202ENST00000427943 OR13C4Q8NGS5 318 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 GPR150Q8NGU9 434 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 ZNF398Q8TD17 642 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 NKD1Q969G9 470 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 SGF29Q96ES7 293 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 TBL1YQ9BQ87 522 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 APMAPQ9HDC9 416 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 IMPACTQ9P2X3 320 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 PSMD13Q9UNM6 376 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 CFAP46Q8IYW2 2715 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 PIEZO2Q9H5I5 2752 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 GOLGA6L9A6NEM1 432 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 MIF4GDA9UHW6 222 aaKnown RBP18.06■□□□□ 0.48
PSPC1-202ENST00000427943 POP7O75817 140 aaKnown RBP18.06■□□□□ 0.48
PSPC1-202ENST00000427943 AMD1P17707 334 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 MSH3P20585 1137 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 HALP42357 657 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 ATP1A2P50993 1020 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 NFE2L1Q14494 772 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 FNBP1LQ5T0N5 605 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 WASH2PQ6VEQ5 465 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 MICALCLQ6ZW33 695 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 PLXDC1Q8IUK5 500 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 RSC1A1Q92681 617 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 WBP1Q96G27 269 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 TGM7Q96PF1 710 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 ASPSCR1Q9BZE9 553 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 ASB8Q9H765 288 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 SLC40A1Q9NP59 571 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 WASH6PQ9NQA3 447 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 FAM8A1Q9UBU6 413 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 R3HDM2Q9Y2K5 976 aaKnown RBP18.06■□□□□ 0.48
PSPC1-202ENST00000427943 COL6A6A6NMZ7 2263 aa18.06■□□□□ 0.48
PSPC1-202ENST00000427943 TCRBV7S2A1N4TA0A589 114 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 C5orf60A6NFR6 353 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 CCL22O00626 93 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 CAPN5O15484 640 aaPredicted RBP18.05■□□□□ 0.48
PSPC1-202ENST00000427943 SRP72O76094 671 aaKnown RBP18.05■□□□□ 0.48
PSPC1-202ENST00000427943 C9P02748 559 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 LEPRP48357 1165 aaKnown RBP18.05■□□□□ 0.48
PSPC1-202ENST00000427943 CYP4F2P78329 520 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 MC2RQ01718 297 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 DMPKQ09013 629 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 KLF1Q13351 362 aaPredicted RBP18.05■□□□□ 0.48
PSPC1-202ENST00000427943 MSLNQ13421 630 aaPredicted RBP18.05■□□□□ 0.48
PSPC1-202ENST00000427943 DENND5AQ6IQ26 1287 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 ARHGEF18Q6ZSZ5 1173 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 CACNA2D3Q8IZS8 1091 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 TXLNBQ8N3L3 684 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 TAB3Q8N5C8 712 aaPredicted RBP18.05■□□□□ 0.48
PSPC1-202ENST00000427943 IL22RA1Q8N6P7 574 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 FAM71DQ8N9W8 422 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 TTC13Q8NBP0 860 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 RTP4Q96DX8 246 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 RNF31Q96EP0 1072 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 C9orf72Q96LT7 481 aa18.05■□□□□ 0.48
PSPC1-202ENST00000427943 RAD1O60671 282 aa18.04■□□□□ 0.48
PSPC1-202ENST00000427943 METTL18O95568 372 aa18.04■□□□□ 0.48
PSPC1-202ENST00000427943 CRTAMO95727 393 aa18.04■□□□□ 0.48
PSPC1-202ENST00000427943 CAPZBP47756 277 aa18.04■□□□□ 0.48
PSPC1-202ENST00000427943 SEPHS1P49903 392 aa18.04■□□□□ 0.48
PSPC1-202ENST00000427943 ZNF140P52738 457 aaPredicted RBP18.04■□□□□ 0.48
PSPC1-202ENST00000427943 GDF10P55107 478 aa18.04■□□□□ 0.48
PSPC1-202ENST00000427943 XIAPP98170 497 aa18.04■□□□□ 0.48
PSPC1-202ENST00000427943 LONRF2Q1L5Z9 754 aa18.04■□□□□ 0.48
PSPC1-202ENST00000427943 CEACAM20Q6UY09 585 aa18.04■□□□□ 0.48
PSPC1-202ENST00000427943 EXTL1Q92935 676 aa18.04■□□□□ 0.48
PSPC1-202ENST00000427943 PPP1R2P1Q96PQ5 205 aa18.04■□□□□ 0.48
PSPC1-202ENST00000427943 FAM96AQ9H5X1 160 aa18.04■□□□□ 0.48
PSPC1-202ENST00000427943 SIDT1Q9NXL6 827 aaKnown RBP18.04■□□□□ 0.48
PSPC1-202ENST00000427943 CRLS1Q9UJA2 301 aa18.04■□□□□ 0.48
PSPC1-202ENST00000427943 KIF1CO43896 1103 aaKnown RBP18.03■□□□□ 0.48
PSPC1-202ENST00000427943 KCNJ13O60928 360 aa18.03■□□□□ 0.48
PSPC1-202ENST00000427943 RASSF9O75901 435 aa18.03■□□□□ 0.48
PSPC1-202ENST00000427943 ANKRD34CP0C6C1 535 aa18.03■□□□□ 0.48
PSPC1-202ENST00000427943 LIFP15018 202 aa18.03■□□□□ 0.48
PSPC1-202ENST00000427943 RPE65Q16518 533 aa18.03■□□□□ 0.48
PSPC1-202ENST00000427943 DUS1LQ6P1R4 473 aaKnown RBP18.03■□□□□ 0.48
PSPC1-202ENST00000427943 KLHDC8BQ8IXV7 354 aa18.03■□□□□ 0.48
PSPC1-202ENST00000427943 ZSCAN1Q8NBB4 408 aa18.03■□□□□ 0.48
PSPC1-202ENST00000427943 HES6Q96HZ4 224 aa18.03■□□□□ 0.48
PSPC1-202ENST00000427943 TEFMQ96QE5 360 aaKnown RBP18.03■□□□□ 0.48
PSPC1-202ENST00000427943 TMEM121Q9BTD3 319 aa18.03■□□□□ 0.48
PSPC1-202ENST00000427943 FBXO8Q9NRD0 319 aa18.03■□□□□ 0.48
PSPC1-202ENST00000427943 IMP3Q9NV31 184 aaKnown RBP18.03■□□□□ 0.48
PSPC1-202ENST00000427943 CFAP20Q9Y6A4 193 aaKnown RBP18.03■□□□□ 0.48
PSPC1-202ENST00000427943 ZNF189O75820 626 aaPredicted RBP18.02■□□□□ 0.48
PSPC1-202ENST00000427943 PPP1CAP62136 330 aa18.02■□□□□ 0.48
PSPC1-202ENST00000427943 PDE1BQ01064 536 aa18.02■□□□□ 0.48
PSPC1-202ENST00000427943 FOXM1Q08050 763 aa18.02■□□□□ 0.48
PSPC1-202ENST00000427943 SEPT6Q14141 434 aa18.02■□□□□ 0.48
PSPC1-202ENST00000427943 PARP6Q2NL67 630 aa18.02■□□□□ 0.48
PSPC1-202ENST00000427943 LINC00303Q3SY05 128 aa18.02■□□□□ 0.48
PSPC1-202ENST00000427943 KCTD11Q693B1 232 aa18.02■□□□□ 0.48
PSPC1-202ENST00000427943 IRGCQ6NXR0 463 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms