RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 RALBP11234 206 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 TSPAN7P41732 249 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 GDF10P55107 478 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 CLCA4Q14CN2 919 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 DCAF12Q5T6F0 453 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 DENND5AQ6IQ26 1287 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 ARHGAP22Q7Z5H3 698 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 RBM12BQ8IXT5 1001 aaKnown RBP18.09■□□□□ 0.49
GPC1-205ENST00000427506 BEND7Q8N7W2 519 aaPredicted RBP18.09■□□□□ 0.49
GPC1-205ENST00000427506 SLC35B2Q8TB61 432 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 JPH3Q8WXH2 748 aaPredicted RBP18.09■□□□□ 0.49
GPC1-205ENST00000427506 ATG4AQ8WYN0 398 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 PMEPA1Q969W9 287 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 SGF29Q96ES7 293 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 DDA1Q9BW61 102 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 ASPSCR1Q9BZE9 553 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 SLC40A1Q9NP59 571 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 PSMD13Q9UNM6 376 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 WDR37Q9Y2I8 494 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 PCDHGA3Q9Y5H0 932 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 B3GALT1Q9Y5Z6 326 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 SLC30A1Q9Y6M5 507 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 TK2O00142 265 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 TPH1P17752 444 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 ITGALP20701 1170 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 RAB15P59190 212 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 XIAPP98170 497 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 DMPKQ09013 629 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 MSLNQ13421 630 aaPredicted RBP18.08■□□□□ 0.48
GPC1-205ENST00000427506 COL9A2Q14055 689 aaPredicted RBP18.08■□□□□ 0.48
GPC1-205ENST00000427506 SEPT6Q14141 434 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 GPR18Q14330 331 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 NFE2L1Q14494 772 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 ANKS6Q68DC2 871 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 KCTD11Q693B1 232 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 VASH2Q86V25 355 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 LSM14AQ8ND56 463 aaKnown RBP18.08■□□□□ 0.48
GPC1-205ENST00000427506 SNRNP27Q8WVK2 155 aaKnown RBP18.08■□□□□ 0.48
GPC1-205ENST00000427506 ULK4Q96C45 1275 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 TGM7Q96PF1 710 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 FAM96AQ9H5X1 160 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 OGFRQ9NZT2 677 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 FAM8A1Q9UBU6 413 aa18.08■□□□□ 0.48
GPC1-205ENST00000427506 PTPRQQ9UMZ3 2332 aa18.07■□□□□ 0.48
GPC1-205ENST00000427506 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.07■□□□□ 0.48
GPC1-205ENST00000427506 EFSO43281 561 aa18.07■□□□□ 0.48
GPC1-205ENST00000427506 STIP1P31948 543 aaKnown RBP18.07■□□□□ 0.48
GPC1-205ENST00000427506 MC4RP32245 332 aa18.07■□□□□ 0.48
GPC1-205ENST00000427506 ATP1A2P50993 1020 aa18.07■□□□□ 0.48
GPC1-205ENST00000427506 ZNF140P52738 457 aaPredicted RBP18.07■□□□□ 0.48
GPC1-205ENST00000427506 GFERP55789 205 aa18.07■□□□□ 0.48
GPC1-205ENST00000427506 SRSF6Q13247 344 aaKnown RBP18.07■□□□□ 0.48
GPC1-205ENST00000427506 KIAA1614Q5VZ46 1190 aa18.07■□□□□ 0.48
GPC1-205ENST00000427506 FAM83HQ6ZRV2 1179 aaPredicted RBP18.07■□□□□ 0.48
GPC1-205ENST00000427506 SNX20Q7Z614 316 aa18.07■□□□□ 0.48
GPC1-205ENST00000427506 DTX1Q86Y01 620 aa18.07■□□□□ 0.48
GPC1-205ENST00000427506 KLHDC8BQ8IXV7 354 aa18.07■□□□□ 0.48
GPC1-205ENST00000427506 ZSCAN1Q8NBB4 408 aa18.07■□□□□ 0.48
GPC1-205ENST00000427506 NAT14Q8WUY8 206 aa18.07■□□□□ 0.48
GPC1-205ENST00000427506 UBE2Q2Q8WVN8 375 aa18.07■□□□□ 0.48
GPC1-205ENST00000427506 ALS2CR12Q96Q35 445 aa18.07■□□□□ 0.48
GPC1-205ENST00000427506 CTRCQ99895 268 aa18.07■□□□□ 0.48
GPC1-205ENST00000427506 ZNF148Q9UQR1 794 aa18.07■□□□□ 0.48
GPC1-205ENST00000427506 IGSF10Q6WRI0 2623 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 MN1Q10571 1320 aaPredicted RBP18.06■□□□□ 0.48
GPC1-205ENST00000427506 MGAT4DA6NG13 374 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 CFAP99D6REC4 459 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 CCL22O00626 93 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 CAPN5O15484 640 aaPredicted RBP18.06■□□□□ 0.48
GPC1-205ENST00000427506 LDB2O43679 373 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 LIASO43766 372 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 RASSF9O75901 435 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 AP2A1O95782 977 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 IFNB1P01574 187 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 PRB1P04280 392 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 LMAN1P49257 510 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 MC2RQ01718 297 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 POU6F1Q14863 301 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 RPS6KA1Q15418 735 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 RPE65Q16518 533 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 ZRANB3Q5FWF4 1079 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 LINC00523Q86TU6 105 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 SLC13A5Q86YT5 568 aaPredicted RBP18.06■□□□□ 0.48
GPC1-205ENST00000427506 NXPE1Q8N323 547 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 BMPERQ8N8U9 685 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 HEXDCQ8WVB3 486 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 DNAJC1Q96KC8 554 aaKnown RBP18.06■□□□□ 0.48
GPC1-205ENST00000427506 C9orf72Q96LT7 481 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 TEFMQ96QE5 360 aaKnown RBP18.06■□□□□ 0.48
GPC1-205ENST00000427506 COPS8Q99627 209 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 C19orf43Q9BQ61 176 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 FRMD8P1Q9BZ68 369 aaPredicted RBP18.06■□□□□ 0.48
GPC1-205ENST00000427506 LZTFL1Q9NQ48 299 aa18.06■□□□□ 0.48
GPC1-205ENST00000427506 IMP3Q9NV31 184 aaKnown RBP18.06■□□□□ 0.48
GPC1-205ENST00000427506 PIH1D1Q9NWS0 290 aaKnown RBP18.06■□□□□ 0.48
GPC1-205ENST00000427506 KLHL33A6NCF5 533 aa18.05■□□□□ 0.48
GPC1-205ENST00000427506 C9P02748 559 aa18.05■□□□□ 0.48
GPC1-205ENST00000427506 CCDC175P0C221 793 aa18.05■□□□□ 0.48
GPC1-205ENST00000427506 SEPHS1P49903 392 aa18.05■□□□□ 0.48
GPC1-205ENST00000427506 ARSDP51689 593 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms