RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CMTR2Q8IYT2 770 aaKnown RBP14.3□□□□□ -0.12
PTPN13-203ENST00000427191 ZBTB2Q8N680 514 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 ZNF527Q8NB42 609 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 BTN2A3PQ96KV6 586 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 MCMBPQ9BTE3 642 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 SHBGP04278 402 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 GSTM3P21266 225 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 ABL2P42684 1182 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 AMIGO2Q86SJ2 522 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 ALYREFQ86V81 257 aaKnown RBP14.3□□□□□ -0.12
PTPN13-203ENST00000427191 SLC43A3Q8NBI5 491 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 TUBGCP5Q96RT8 1024 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 TPK1Q9H3S4 243 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 PCDH18Q9HCL0 1135 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 PIH1D1Q9NWS0 290 aaKnown RBP14.3□□□□□ -0.12
PTPN13-203ENST00000427191 MOCS1Q9NZB8 636 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 OR6C75A6NL08 312 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 CCNFP41002 786 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 ZNF155Q12901 538 aaPredicted RBP14.3□□□□□ -0.12
PTPN13-203ENST00000427191 ILF3Q12906 894 aaKnown RBP eCLIP14.3□□□□□ -0.12
PTPN13-203ENST00000427191 THAP6Q8TBB0 222 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 DUSP16Q9BY84 665 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 MAU2Q9Y6X3 613 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 LRATO95237 230 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 ZNF132P52740 706 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 C1orf216Q8TAB5 229 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 KCTD7Q96MP8 289 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 GRIN2DO15399 1336 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 SLC35G6P0C7Q6 338 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 IL12BP29460 328 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 USF2Q15853 346 aaPredicted RBP14.29□□□□□ -0.12
PTPN13-203ENST00000427191 TNS4Q8IZW8 715 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 OR2AJ1Q8NGZ0 328 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 DIP2AQ14689 1571 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 IL1BP01584 269 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 GBX2P52951 348 aaPredicted RBP14.29□□□□□ -0.12
PTPN13-203ENST00000427191 SPATA31A1Q5TZJ5 1347 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 PCP4L1A6NKN8 68 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 C16orf59Q7L2K0 433 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 KLHL36Q8N4N3 616 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 ZBED6CLQ96FA7 236 aaPredicted RBP14.29□□□□□ -0.12
PTPN13-203ENST00000427191 GBA2Q9HCG7 927 aaPredicted RBP14.29□□□□□ -0.12
PTPN13-203ENST00000427191 HHATLQ9HCP6 504 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 TMEM39AQ9NV64 488 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 EGFL7Q9UHF1 273 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 FAM86B2P0C5J1 330 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 MAPK3P27361 379 aaPredicted RBP14.29□□□□□ -0.12
PTPN13-203ENST00000427191 OCLNQ16625 522 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 HDAC10Q969S8 669 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 RDH8Q9NYR8 311 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 EIF3KQ9UBQ5 218 aaKnown RBP14.29□□□□□ -0.12
PTPN13-203ENST00000427191 PRKD3O94806 890 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 MATN4O95460 622 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 GRIA1P42261 906 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 XKR4Q5GH76 650 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 MED27Q6P2C8 311 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 MON1AQ86VX9 555 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 CXorf21Q9HAI6 301 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 CYP3A7-CYP3A51PA0A087WV96 503 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 EFCAB9A8MZ26 197 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 HMGN1P05114 100 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 HDCP19113 662 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 CYP3A7P24462 503 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 CCR10P46092 362 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 IST1P53990 364 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 TGFB2P61812 414 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 ADAM15Q13444 863 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 IQCCQ4KMZ1 466 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 LINGO2Q7L985 606 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 HCAR2Q8TDS4 363 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 TWIST2Q8WVJ9 160 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 AZIN2Q96A70 460 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 MTFR1LQ9H019 292 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 NKIRAS2Q9NYR9 191 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 TAS2R1Q9NYW7 299 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 MED31Q9Y3C7 131 aa14.29□□□□□ -0.12
PTPN13-203ENST00000427191 H6PDO95479 791 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 HNRNPLP14866 589 aaKnown RBP eCLIP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 SPAM1P38567 509 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 MRPS5P82675 430 aaKnown RBP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 PLEKHN1Q494U1 663 aaPredicted RBP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 TOP1MTQ969P6 601 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 NPAS2Q99743 824 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 MSRAQ9UJ68 235 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 LMTK2Q8IWU2 1503 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 VSTM5A8MXK1 200 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 NPHS1O60500 1241 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 PSKH1P11801 424 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 SEPHS1P49903 392 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 POU5F1Q01860 360 aaKnown RBP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 ZC3H12AQ5D1E8 599 aaKnown RBP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 LYARQ9NX58 379 aaKnown RBP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 HNRNPH3P31942 346 aaKnown RBP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 MASP1P48740 699 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 MRPS6P82932 125 aaKnown RBP14.28□□□□□ -0.12
PTPN13-203ENST00000427191 CDKL4Q5MAI5 379 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 AVL9Q8NBF6 648 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 TUBA1CQ9BQE3 449 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 GBA3Q9H227 469 aa14.28□□□□□ -0.12
PTPN13-203ENST00000427191 TRIM64A6NGJ6 449 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms