RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 ZCWPW2A0A1B0GU75 182 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 FAM237BA0A1B0GVD1 139 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 PRSS38A1L453 326 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 OR51F1A6NGY5 319 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 FAM229AH3BQW9 127 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 J3QW42 95 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 CHUKO15111 745 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 SCAMP1O15126 338 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 VEGFDO43915 354 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 SH3BP5O60239 455 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 NUAK1O60285 661 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 SDC3O75056 442 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 MTX2O75431 263 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 BANF1O75531 89 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 PRAMEF1O95521 474 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 ASMTLO95671 621 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 GOT2P00505 430 aaKnown RBP7.32□□□□□ -1.24
LINC01049-201ENST00000426840 ZNF8P17098 575 aaPredicted RBP7.32□□□□□ -1.24
LINC01049-201ENST00000426840 ARNTP27540 789 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 EPHA8P29322 1005 aaPredicted RBP7.32□□□□□ -1.24
LINC01049-201ENST00000426840 MC4RP32245 332 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 FOXN2P32314 431 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 ARCN1P48444 511 aaKnown RBP7.32□□□□□ -1.24
LINC01049-201ENST00000426840 ARRB1P49407 418 aaPredicted RBP7.32□□□□□ -1.24
LINC01049-201ENST00000426840 CCT8P50990 548 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 HNRNPKP61978 463 aaKnown RBP eCLIP7.32□□□□□ -1.24
LINC01049-201ENST00000426840 B4GALNT1Q00973 533 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 IL9RQ01113 521 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 CACNG1Q06432 222 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 TMEM115Q12893 351 aaPredicted RBP7.32□□□□□ -1.24
LINC01049-201ENST00000426840 NFATC2Q13469 925 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 ITGA9Q13797 1035 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 UAP1L1Q3KQV9 507 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 GPR33Q49SQ1 333 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 ANKRD20A4Q4UJ75 823 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 GLE1Q53GS7 698 aaKnown RBP7.32□□□□□ -1.24
LINC01049-201ENST00000426840 GPRC6AQ5T6X5 926 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 DOK6Q6PKX4 331 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 ZDHHC24Q6UX98 284 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 MARK2Q7KZI7 788 aaKnown RBP7.32□□□□□ -1.24
LINC01049-201ENST00000426840 PIP4P1Q86T03 277 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 NRROSQ86YC3 692 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 HID1Q8IV36 788 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 BBOF1Q8ND07 529 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 LRRN4CLQ8ND94 238 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 DDHD1Q8NEL9 900 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 OR4L1Q8NH43 312 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 CCL4L1Q8NHW4 92 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 NETO1Q8TDF5 533 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 LMX1AQ8TE12 382 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 ART4Q93070 314 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 MFSD3Q96ES6 412 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 EBNA1BP2Q99848 306 aaKnown RBP7.32□□□□□ -1.24
LINC01049-201ENST00000426840 WDR83Q9BRX9 315 aaKnown RBP7.32□□□□□ -1.24
LINC01049-201ENST00000426840 TMEM168Q9H0V1 697 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 OR2AG1Q9H205 316 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 PLAC1Q9HBJ0 212 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 MOSPD1Q9UJG1 213 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 SUFUQ9UMX1 484 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 BTBD3Q9Y2F9 522 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 UTP11Q9Y3A2 253 aaKnown RBP7.32□□□□□ -1.24
LINC01049-201ENST00000426840 PLEKHM1Q9Y4G2 1056 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 ST14Q9Y5Y6 855 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 CSNK1G3Q9Y6M4 447 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 SLC30A1Q9Y6M5 507 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 FAM169AQ9Y6X4 670 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 LRP4O75096 1905 aa7.32□□□□□ -1.24
LINC01049-201ENST00000426840 ZNF106Q9H2Y7 1883 aaKnown RBP7.32□□□□□ -1.24
LINC01049-201ENST00000426840 ARHGEF17Q96PE2 2063 aaPredicted RBP7.31□□□□□ -1.24
LINC01049-201ENST00000426840 IGLV3-16A0A075B6K0 115 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 ESYT3A0FGR9 886 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 E7ESA3 106 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 TRIM38O00635 465 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 NDC80O14777 642 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 SLC30A4O14863 429 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 YY2O15391 372 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 YKT6O15498 198 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 AQP9O43315 295 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 SGTAO43765 313 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 CBFA2T3O75081 653 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 CDK14O94921 469 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 VAPBO95292 243 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 ITGALP20701 1170 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 EIF1AXP47813 144 aaKnown RBP7.31□□□□□ -1.24
LINC01049-201ENST00000426840 SERPINB4P48594 390 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 BLKP51451 505 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 PLTPP55058 493 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 PRAMEP78395 509 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 CALCOCO2Q13137 446 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 SEMA3AQ14563 771 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 SUZ12Q15022 739 aaKnown RBP7.31□□□□□ -1.24
LINC01049-201ENST00000426840 BBS9Q3SYG4 887 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 PRRT3Q5FWE3 981 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 ZRANB3Q5FWF4 1079 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 LDLRAP1Q5SW96 308 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 KIAA0930Q6ICG6 404 aaPredicted RBP7.31□□□□□ -1.24
LINC01049-201ENST00000426840 C8orf74Q6P047 294 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 CASC4Q6P4E1 433 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 C20orf204Q6ZNR8 217 aa7.31□□□□□ -1.24
LINC01049-201ENST00000426840 TAS2R42Q7RTR8 314 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms