RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 DPPA4Q7L190 304 aa6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 TRAPPC11Q7Z392 1133 aa6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 HACE1Q8IYU2 909 aa6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 SCCPDHQ8NBX0 429 aa6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 ARRDC2Q8TBH0 407 aa6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 ERGIC1Q969X5 290 aa6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 SAT2Q96F10 170 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 VCPIP1Q96JH7 1222 aa6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 ZNF570Q96NI8 536 aa6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 ESRP2Q9H6T0 727 aaKnown RBP6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 CLK4Q9HAZ1 481 aaKnown RBP6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 NRIP3Q9NQ35 241 aa6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 DECR2Q9NUI1 292 aa6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 TUBA8Q9NY65 449 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 PADI1Q9ULC6 663 aa6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 ERVK-11Q9UQG0 969 aa6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 AK9Q5TCS8 1911 aa6.35□□□□□ -1.39
HMGB1P32-201ENST00000425971 A0A0G2JMZ2 1700 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 A0A1W2PR77 199 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 DAB1O75553 588 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 THPOP40225 353 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 ALDH7A1P49419 539 aaKnown RBP6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 P2RX3P56373 397 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 PPIL2Q13356 520 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 NAB2Q15742 525 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 FAM133BQ5BKY9 247 aaKnown RBP6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 LRIF1Q5T3J3 769 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 GARNL3Q5VVW2 1013 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 ZNF626Q68DY1 528 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 ERO1BQ86YB8 467 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 ARFGAP1Q8N6T3 406 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 CCDC191Q8NCU4 936 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 NTN5Q8WTR8 489 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 PRPF31Q8WWY3 499 aaKnown RBP6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 TRIB2Q92519 343 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 ZG16BQ96DA0 208 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 GFM1Q96RP9 751 aaKnown RBP6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 PARK7Q99497 189 aaKnown RBP6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 SLC28A3Q9HAS3 691 aa6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 SIRT3Q9NTG7 399 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 CWC15Q9P013 229 aaKnown RBP6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 MARCH4Q9P2E8 410 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P32-201ENST00000425971 FRMPD3Q5JV73 1810 aa6.34□□□□□ -1.4
HMGB1P32-201ENST00000425971 ARAP2Q8WZ64 1704 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 ASH1LQ9NR48 2969 aaKnown RBP6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 COL4A6Q14031 1691 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 SH3TC1Q8TE82 1336 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 TMEM272A0A1B0GTI8 110 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 A8MV72 311 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 WNT9BO14905 357 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 DKC1O60832 514 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 ACTN1P12814 892 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 CD58P19256 250 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 TNFRSF1BP20333 461 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 MAOAP21397 527 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 SAT1P21673 171 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 TAS2R40P59535 323 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 RPS8P62241 208 aaKnown RBP6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 SRSF4Q08170 494 aaKnown RBP6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 RASA2Q15283 850 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 RBMS2Q15434 407 aaKnown RBP6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 CCDC96Q2M329 555 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 MMEL1Q495T6 779 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 BMP2KLQ5H9B9 411 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 SHC4Q6S5L8 630 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 KBTBD6Q86V97 674 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 PRMT6Q96LA8 375 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 APOLD1Q96LR9 279 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 HARBI1Q96MB7 349 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 ACOX2Q99424 681 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 LTB4R2Q9NPC1 389 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 HINT3Q9NQE9 182 aaKnown RBP6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 TRNAU1APQ9NX07 287 aaKnown RBP6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 TRMT112Q9UI30 125 aaKnown RBP6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 BTBD3Q9Y2F9 522 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 FRMD4BQ9Y2L6 1034 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 PTRH2Q9Y3E5 179 aaKnown RBP6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 ZNF711Q9Y462 761 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 CMAHPQ9Y471 501 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 SRPRBQ9Y5M8 271 aaKnown RBP6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 FAM169AQ9Y6X4 670 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 NAV2Q8IVL1 2488 aa6.33□□□□□ -1.4
HMGB1P32-201ENST00000425971 GCN1Q92616 2671 aaKnown RBP6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 PLXNA3P51805 1871 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 C1orf226A1L170 272 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 I6L893 689 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 UBE2CO00762 179 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 VCYO14598 125 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 OGG1O15527 345 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 MITFO75030 526 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 ZC3H11AO75152 810 aaKnown RBP eCLIP6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 JRKO75564 520 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 FGBP02675 491 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 CYC1P08574 325 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 ARSBP15848 533 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 METAP2P50579 478 aaKnown RBP eCLIP6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 PNLIPRP2P54317 469 aa6.32□□□□□ -1.4
HMGB1P32-201ENST00000425971 ZP1P60852 638 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms