RNA–Protein interactions for RNA: ENST00000425967.7

FGFR1-211, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 5,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-211ENST00000425967 PCED1BQ96HM7 432 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 RBM4BQ9BQ04 359 aaKnown RBP12.5□□□□□ -0.41
FGFR1-211ENST00000425967 RBM4Q9BWF3 364 aaKnown RBP12.5□□□□□ -0.41
FGFR1-211ENST00000425967 RIPK3Q9Y572 518 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 TIMM22Q9Y584 194 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 OAS3Q9Y6K5 1087 aaKnown RBP12.5□□□□□ -0.41
FGFR1-211ENST00000425967 C8GP07360 202 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 BLKP51451 505 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 SEC13P55735 322 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 MTX3Q5HYI7 312 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 IQCKQ8N0W5 287 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 ATP6V1C2Q8NEY4 427 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 HMCESQ96FZ2 354 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 FGFBP2Q9BYJ0 223 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 ST6GALNAC4Q9H4F1 302 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 IFT80Q9P2H3 777 aaPredicted RBP12.5□□□□□ -0.41
FGFR1-211ENST00000425967 DHRS7Q9Y394 339 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 PRKAB1Q9Y478 270 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 PCDHGC4Q9Y5F7 938 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 AK5Q9Y6K8 562 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 IQCF5A8MTL0 148 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 FFAR2O15552 330 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 DNAJA2O60884 412 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 USP2O75604 605 aaPredicted RBP12.5□□□□□ -0.41
FGFR1-211ENST00000425967 IGFBP5P24593 272 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 AVPR1BP47901 424 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 CHIT1Q13231 466 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 QPCTQ16769 361 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 TAC4Q86UU9 113 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 RANBP3LQ86VV4 465 aaPredicted RBP12.5□□□□□ -0.41
FGFR1-211ENST00000425967 PQLC1Q8N2U9 271 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 OR2T34Q8NGX1 318 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 OR2T3Q8NH03 318 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 ZNF483Q8TF39 744 aaPredicted RBP12.5□□□□□ -0.41
FGFR1-211ENST00000425967 ARHGEF4Q9NR80 690 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 FBXW2Q9UKT8 454 aa12.5□□□□□ -0.41
FGFR1-211ENST00000425967 FCF1Q9Y324 198 aaKnown RBP12.5□□□□□ -0.41
FGFR1-211ENST00000425967 TIPRLO75663 272 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 CDKN2BP42772 138 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 LIMK2P53671 638 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 DMPKQ09013 629 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 CRY2Q49AN0 593 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 TSTD2Q5T7W7 516 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 ZMIZ2Q8NF64 920 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 SNX33Q8WV41 574 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 AZIN2Q96A70 460 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 CAPNS2Q96L46 248 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 SRMSQ9H3Y6 488 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 SMURF2Q9HAU4 748 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 NEUROD4Q9HD90 331 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 TRMT13Q9NUP7 481 aaKnown RBP12.49□□□□□ -0.41
FGFR1-211ENST00000425967 CDH7Q9ULB5 785 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 COMMD3-BMI1R4GMX3 469 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 SLC38A8A6NNN8 435 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 HCN1O60741 890 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 ESR1P03372 595 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 IL12BP29460 328 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 LILRA4P59901 499 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 FUT2Q10981 343 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 HEPACAMQ14CZ8 416 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 TMEM220Q6QAJ8 160 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 FAM131AQ6UXB0 335 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 SPPL2CQ8IUH8 684 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 CRYBG2Q8N1P7 616 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 PIGXQ8TBF5 258 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 FAM81AQ8TBF8 368 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 BRSK1Q8TDC3 778 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 C11orf84Q9BUA3 381 aaPredicted RBP12.49□□□□□ -0.41
FGFR1-211ENST00000425967 CERS4Q9HA82 394 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 FADS3Q9Y5Q0 445 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 SNHG28P0DPA3 235 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 PTGER3P43115 390 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 DNASE1L1P49184 302 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 HNRNPDQ14103 355 aaKnown RBP12.49□□□□□ -0.41
FGFR1-211ENST00000425967 C5orf22Q49AR2 442 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 LDLRAP1Q5SW96 308 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 METTL21CQ5VZV1 264 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 RALGPS2Q86X27 583 aaPredicted RBP12.49□□□□□ -0.41
FGFR1-211ENST00000425967 MEIOBQ8N635 442 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 GPN1Q9HCN4 374 aaPredicted RBP12.49□□□□□ -0.41
FGFR1-211ENST00000425967 DCLK1O15075 740 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 AHCYL1O43865 530 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 GMFGO60234 142 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 NADKO95544 446 aaPredicted RBP12.49□□□□□ -0.41
FGFR1-211ENST00000425967 PRPS2P11908 318 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 SMPD1P17405 629 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 TMEM139Q8IV31 216 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 KREMEN2Q8NCW0 462 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 TNFRSF25Q93038 417 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 GAL3ST4Q96RP7 486 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 TRIM2Q9C040 744 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 ZNF180Q9UJW8 692 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 PREX1Q8TCU6 1659 aa12.49□□□□□ -0.41
FGFR1-211ENST00000425967 A0A1W2PQ72 361 aa12.48□□□□□ -0.41
FGFR1-211ENST00000425967 GPR25O00155 361 aa12.48□□□□□ -0.41
FGFR1-211ENST00000425967 TLX3O43711 291 aaPredicted RBP12.48□□□□□ -0.41
FGFR1-211ENST00000425967 RLN1P04808 185 aa12.48□□□□□ -0.41
FGFR1-211ENST00000425967 CCNFP41002 786 aa12.48□□□□□ -0.41
FGFR1-211ENST00000425967 MPP1Q00013 466 aa12.48□□□□□ -0.41
FGFR1-211ENST00000425967 PTP4A2Q12974 167 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms