RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 GCNT7Q6ZNI0 430 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 CILP2Q8IUL8 1156 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 WDR75Q8IWA0 830 aaKnown RBP15.45■□□□□ 0.06
SHOX2-202ENST00000425436 DENND6AQ8IWF6 608 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 TTC30BQ8N4P2 665 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 FITM2Q8N6M3 262 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 TMEM145Q8NBT3 493 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 OR6P1Q8NGX9 317 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 SCAMP4Q969E2 229 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 TCEAL3Q969E4 200 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 HDAC10Q969S8 669 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 NUS1Q96E22 293 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 DTD2Q96FN9 168 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 ATXN7L3BQ96GX2 97 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 MECRQ9BV79 373 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 C1QTNF7Q9BXJ2 289 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 ABCG8Q9H221 673 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 STN1Q9H668 368 aaKnown RBP15.45■□□□□ 0.06
SHOX2-202ENST00000425436 TXLNGQ9NUQ3 528 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 FNDC3AQ9Y2H6 1198 aaKnown RBP15.45■□□□□ 0.06
SHOX2-202ENST00000425436 PCDHGA5Q9Y5G8 931 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 DNAH14Q0VDD8 3507 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 KNL1Q8NG31 2342 aa15.45■□□□□ 0.06
SHOX2-202ENST00000425436 TMEM114B3SHH9 223 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 ANKRD65E5RJM6 399 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 FPGTO14772 594 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 RALBP11234 206 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 OGNP20774 298 aaKnown RBP15.44■□□□□ 0.06
SHOX2-202ENST00000425436 CD38P28907 300 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 RASSF2P50749 326 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 AFF3P51826 1226 aaKnown RBP15.44■□□□□ 0.06
SHOX2-202ENST00000425436 IRX4P78413 519 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 SF3A3Q12874 501 aaKnown RBP eCLIP15.44■□□□□ 0.06
SHOX2-202ENST00000425436 INPP5AQ14642 412 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 AGERQ15109 404 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 TRIM61Q5EBN2 209 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 PLA2G2CQ5R387 149 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 AP2M1Q96CW1 435 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 ELMO2Q96JJ3 720 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 RMDN2Q96LZ7 410 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 TCF12Q99081 682 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 C19orf43Q9BQ61 176 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 SUSD2Q9UGT4 822 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 VPS9D1Q9Y2B5 631 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 HS3ST3A1Q9Y663 406 aa15.44■□□□□ 0.06
SHOX2-202ENST00000425436 A0A1B0GVT2 93 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 A0A1W2PR77 199 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 TRIM13O60858 407 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 DNAJC6O75061 913 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 UBOX5O94941 541 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 KLHL2O95198 593 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 HMGCLP35914 325 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 SLC1A6P48664 564 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 MPP1Q00013 466 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 PCLAFQ15004 111 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 SF3A2Q15428 464 aaKnown RBP15.43■□□□□ 0.06
SHOX2-202ENST00000425436 SMAD1Q15797 465 aaKnown RBP15.43■□□□□ 0.06
SHOX2-202ENST00000425436 Q6ZSR6 202 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 TBC1D1Q86TI0 1168 aaPredicted RBP15.43■□□□□ 0.06
SHOX2-202ENST00000425436 GPR26Q8NDV2 337 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 KLHDC7BQ96G42 594 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 RIOK2Q9BVS4 552 aaKnown RBP15.43■□□□□ 0.06
SHOX2-202ENST00000425436 WWP1Q9H0M0 922 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 CAB39LQ9H9S4 337 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 PARD6AQ9NPB6 346 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 SAR1AQ9NR31 198 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 NLE1Q9NVX2 485 aaPredicted RBP15.43■□□□□ 0.06
SHOX2-202ENST00000425436 PKD2L2Q9NZM6 624 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 VWA7Q9Y334 891 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 OR1A2Q9Y585 309 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 CAPN7Q9Y6W3 813 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 OTOGLQ3ZCN5 2332 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 SCN8AQ9UQD0 1980 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 PRR5-ARHGAP8B1AHC4 643 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 HAUS5O94927 633 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 THEGLP0DJG4 465 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 MYL2P10916 166 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 FGF3P11487 239 aaPredicted RBP15.43■□□□□ 0.06
SHOX2-202ENST00000425436 BPIP17213 487 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 LPOP22079 712 aaPredicted RBP15.43■□□□□ 0.06
SHOX2-202ENST00000425436 HOXD12P35452 270 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 DPP6P42658 865 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 HK2P52789 917 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 BNC1Q01954 994 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 FAM83EQ2M2I3 478 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 PRAMEF14Q5SWL7 426 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 AGAP9Q5VTM2 703 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 FAM45BPQ6NSW5 357 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 PNCKQ6P2M8 343 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 KLC3Q6P597 504 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 SLC23A3Q6PIS1 610 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 PTAR1Q7Z6K3 402 aaPredicted RBP15.43■□□□□ 0.06
SHOX2-202ENST00000425436 ABI3BPQ7Z7G0 1075 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 C10orf107Q8IVU9 208 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 NRSN1Q8IZ57 195 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 GPATCH11Q8N954 259 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 MFSD2AQ8NA29 543 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 DENND6BQ8NEG7 585 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 OR13H1Q8NG92 308 aa15.43■□□□□ 0.06
SHOX2-202ENST00000425436 OR4K2Q8NGD2 314 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms