RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 EEF1AKMT1Q8WVE0 214 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 SKA2Q8WVK7 121 aaPredicted RBP13.23□□□□□ -0.29
PRPF39-202ENST00000424478 MOCOSQ96EN8 888 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 OSGEPL1Q9H4B0 414 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 NSMCE4AQ9NXX6 385 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 H3BMM5 538 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 SDC3O75056 442 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 ATP1A2P50993 1020 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 CLCN7P51798 805 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 ANKRD42Q8N9B4 389 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 LMNTD1Q8N9Z9 388 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 EXT2Q93063 718 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 NXNL1Q96CM4 212 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 ATP6V1G3Q96LB4 118 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 TTC1Q99614 292 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 SELENOSQ9BQE4 189 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 IER2Q9BTL4 223 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 TMEM168Q9H0V1 697 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 KCNK9Q9NPC2 374 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 GNPTGQ9UJJ9 305 aa13.23□□□□□ -0.29
PRPF39-202ENST00000424478 TMEM131Q92545 1883 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 TRBV23OR9-2A0A075B6M9 112 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 LILRB5O75023 590 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 POP7O75817 140 aaKnown RBP13.22□□□□□ -0.29
PRPF39-202ENST00000424478 RASGRP1O95267 797 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 CCDC166P0CW27 439 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 FDXRP22570 491 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 RAB10P61026 200 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 NAB1Q13506 487 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 RNF187Q5TA31 235 aaPredicted RBP13.22□□□□□ -0.29
PRPF39-202ENST00000424478 ZNF449Q6P9G9 518 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 OTOAQ7RTW8 1153 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 C11orf96Q7Z7L8 435 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 LMNTD2Q8IXW0 634 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 CFAP206Q8IYR0 622 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 CFAP61Q8NHU2 1237 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 FAM86C1Q9NVL1 165 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 CPSF2Q9P2I0 782 aaKnown RBP13.22□□□□□ -0.29
PRPF39-202ENST00000424478 SLC17A7Q9P2U7 560 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 FANCMQ8IYD8 2048 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 A0A1B0GVT2 93 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 CFAP99D6REC4 459 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 ESR1P03372 595 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 RALBP11234 206 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 BRAFP15056 766 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 SERPINB9P50453 376 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 IL9RQ01113 521 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 SIM2Q14190 667 aaPredicted RBP13.22□□□□□ -0.29
PRPF39-202ENST00000424478 ITIH4Q14624 930 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 ALG11Q2TAA5 492 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 PMS2CLQ68D20 193 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 ABI3BPQ7Z7G0 1075 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 SPATS2Q86XZ4 545 aaKnown RBP13.22□□□□□ -0.29
PRPF39-202ENST00000424478 CENPLQ8N0S6 344 aaPredicted RBP13.22□□□□□ -0.29
PRPF39-202ENST00000424478 CADM4Q8NFZ8 388 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 C1orf216Q8TAB5 229 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 PGM2Q96G03 612 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 FETUBQ9UGM5 382 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 TP53BP1Q12888 1972 aaPredicted RBP13.22□□□□□ -0.29
PRPF39-202ENST00000424478 PRAMEF33A0A0G2JMD5 474 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 PRSS38A1L453 326 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 A6NNZ2 444 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 GRID2O43424 1007 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 NUAK1O60285 661 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 SNX2O60749 519 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 CD38P28907 300 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 SERPINB8P50452 374 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 NFATC4Q14934 902 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 INSCQ1MX18 579 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 ARMC3Q5W041 872 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 LYSMD4Q5XG99 296 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 FAM45BPQ6NSW5 357 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 XKR5Q6UX68 686 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 SLC36A4Q6YBV0 504 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 SH2D5Q6ZV89 423 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 OR56A4Q8NGH8 313 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 GABPB2Q8TAK5 448 aaPredicted RBP13.22□□□□□ -0.29
PRPF39-202ENST00000424478 FAM45AQ8TCE6 357 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 KLHDC7BQ96G42 594 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 DNAJC28Q9NX36 388 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 TAS2R13Q9NYV9 303 aa13.22□□□□□ -0.29
PRPF39-202ENST00000424478 TRMT6Q9UJA5 497 aaKnown RBP13.22□□□□□ -0.29
PRPF39-202ENST00000424478 RIF1Q5UIP0 2472 aaKnown RBP13.21□□□□□ -0.29
PRPF39-202ENST00000424478 OR56A5P0C7T3 313 aa13.21□□□□□ -0.29
PRPF39-202ENST00000424478 RPA3P35244 121 aaPredicted RBP13.21□□□□□ -0.29
PRPF39-202ENST00000424478 GTF2H3Q13889 308 aa13.21□□□□□ -0.29
PRPF39-202ENST00000424478 FZD2Q14332 565 aa13.21□□□□□ -0.29
PRPF39-202ENST00000424478 FAM219BQ5XKK7 198 aa13.21□□□□□ -0.29
PRPF39-202ENST00000424478 TTC19Q6DKK2 380 aaPredicted RBP13.21□□□□□ -0.29
PRPF39-202ENST00000424478 SLC30A9Q6PML9 568 aa13.21□□□□□ -0.29
PRPF39-202ENST00000424478 LINGO1Q96FE5 620 aa13.21□□□□□ -0.29
PRPF39-202ENST00000424478 KLC4Q9NSK0 619 aa13.21□□□□□ -0.29
PRPF39-202ENST00000424478 UTP6Q9NYH9 597 aaKnown RBP13.21□□□□□ -0.29
PRPF39-202ENST00000424478 ZFC3H1O60293 1989 aaKnown RBP13.21□□□□□ -0.29
PRPF39-202ENST00000424478 PFDN6O15212 129 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 ZBTB14O43829 449 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 OPA1O60313 960 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 VPS26AO75436 327 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 EML2O95834 649 aa13.21□□□□□ -0.3
PRPF39-202ENST00000424478 HOXA6P31267 233 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms