RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 BROXQ5VW32 411 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 CNKSR3Q6P9H4 555 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 NPAS4Q8IUM7 802 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 TTC16Q8NEE8 873 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 TRIM54Q9BYV2 358 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 TOR3AQ9H497 397 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 RAD21L1Q9H4I0 556 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 ZNF639Q9UID6 485 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 FAM50BQ9Y247 325 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 WDR37Q9Y2I8 494 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 RBMX2Q9Y388 322 aaKnown RBP14.18□□□□□ -0.14
MSH5-206ENST00000423982 ARL5AQ9Y689 179 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 CCDC154A6NI56 674 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 SUPT3HB4E1H0 165 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 BCAS1O75363 584 aaPredicted RBP14.18□□□□□ -0.14
MSH5-206ENST00000423982 CRCPO75575 148 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 CYBBP04839 570 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 FGF4P08620 206 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 HAPLN1P10915 354 aaPredicted RBP14.18□□□□□ -0.14
MSH5-206ENST00000423982 CRHBPP24387 322 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 RPL9P32969 192 aaKnown RBP14.18□□□□□ -0.14
MSH5-206ENST00000423982 CLCQ05315 142 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 RCAN2Q14206 197 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 CTU2Q2VPK5 515 aaKnown RBP14.18□□□□□ -0.14
MSH5-206ENST00000423982 GLYATQ6IB77 296 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 PTRH1Q86Y79 214 aaKnown RBP14.18□□□□□ -0.14
MSH5-206ENST00000423982 DTWD1Q8N5C7 304 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 PAPD5Q8NDF8 572 aaKnown RBP14.18□□□□□ -0.14
MSH5-206ENST00000423982 CALML6Q8TD86 181 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 MYLPFQ96A32 169 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 NOL6Q9H6R4 1146 aaKnown RBP14.18□□□□□ -0.14
MSH5-206ENST00000423982 TMLHEQ9NVH6 421 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 HACD3Q9P035 362 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 TMEM9Q9P0T7 183 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 ZNF225Q9UK10 706 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 SLC30A1Q9Y6M5 507 aa14.18□□□□□ -0.14
MSH5-206ENST00000423982 TTC36A6NLP5 189 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 PTGES3LE9PB15 166 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 INMTO95050 263 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 ALPLP05186 524 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 IDO1P14902 403 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 SLC11A1P49279 550 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 ARPP19P56211 112 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 LSM3P62310 102 aaKnown RBP14.17□□□□□ -0.14
MSH5-206ENST00000423982 ZNF362Q5T0B9 420 aaPredicted RBP14.17□□□□□ -0.14
MSH5-206ENST00000423982 SLC16A12Q6ZSM3 486 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 TERB1Q8NA31 727 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 OR13C4Q8NGS5 318 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 BPIFB1Q8TDL5 484 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 CASP10Q92851 521 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 FKBP10Q96AY3 582 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 ITCHQ96J02 903 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 CDK15Q96Q40 435 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 ALPK1Q96QP1 1244 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 ATOH8Q96SQ7 321 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 TUBA1CQ9BQE3 449 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 AASSQ9UDR5 926 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 ASB1Q9Y576 335 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 CPQQ9Y646 472 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 HTR3EA5X5Y0 456 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 ABCB7O75027 752 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 PEX11BO96011 259 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 MMP2P08253 660 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 C7P10643 843 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 ODC1P11926 461 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 ZNF37AP17032 561 aaPredicted RBP14.17□□□□□ -0.14
MSH5-206ENST00000423982 TMED10P49755 219 aaKnown RBP14.17□□□□□ -0.14
MSH5-206ENST00000423982 NFKB2Q00653 900 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 FPGSQ05932 587 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 DSC1Q08554 894 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 DNASE1L3Q13609 305 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 SIRPB2Q5JXA9 342 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 TMEM53Q6P2H8 277 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 CRTC3Q6UUV7 619 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 RBM23Q86U06 439 aaKnown RBP14.17□□□□□ -0.14
MSH5-206ENST00000423982 RIMKLAQ8IXN7 391 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 TMEM199Q8N511 208 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 HERC2P3Q9BVR0 1158 aa14.17□□□□□ -0.14
MSH5-206ENST00000423982 CXXC1Q9P0U4 656 aaPredicted RBP14.17□□□□□ -0.14
MSH5-206ENST00000423982 GOT2P00505 430 aaKnown RBP14.16□□□□□ -0.14
MSH5-206ENST00000423982 THRBP10828 461 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 FDXRP22570 491 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 JAK1P23458 1154 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 DAG1Q14118 895 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 SPIDRQ14159 915 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 NKG7Q16617 165 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 SYVN1Q86TM6 617 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 CCDC117Q8IWD4 279 aaPredicted RBP14.16□□□□□ -0.14
MSH5-206ENST00000423982 BLOC1S5Q8TDH9 187 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 RAB2BQ8WUD1 216 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 SH3YL1Q96HL8 342 aaPredicted RBP14.16□□□□□ -0.14
MSH5-206ENST00000423982 BDH2Q9BUT1 245 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 GPR62Q9BZJ7 368 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 AMBRA1Q9C0C7 1298 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 POLE4Q9NR33 117 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 PCDHB3Q9Y5E6 796 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 CDC7O00311 574 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 IRAK2O43187 625 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 LDB2O43679 373 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 SLC22A3O75751 556 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms