RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 STAMBPL1Q96FJ0 436 aa18.14■□□□□ 0.49
HDAC6-205ENST00000423941 PWWP2AQ96N64 755 aa18.14■□□□□ 0.49
HDAC6-205ENST00000423941 TCF12Q99081 682 aa18.14■□□□□ 0.49
HDAC6-205ENST00000423941 TTC1Q99614 292 aa18.14■□□□□ 0.49
HDAC6-205ENST00000423941 NAT9Q9BTE0 207 aa18.14■□□□□ 0.49
HDAC6-205ENST00000423941 TRIM31Q9BZY9 425 aa18.14■□□□□ 0.49
HDAC6-205ENST00000423941 PLAC1Q9HBJ0 212 aa18.14■□□□□ 0.49
HDAC6-205ENST00000423941 CATSPERZQ9NTU4 200 aa18.14■□□□□ 0.49
HDAC6-205ENST00000423941 RABGEF1Q9UJ41 708 aa18.14■□□□□ 0.49
HDAC6-205ENST00000423941 PRSS21Q9Y6M0 314 aa18.14■□□□□ 0.49
HDAC6-205ENST00000423941 RPS6KL1Q9Y6S9 549 aa18.14■□□□□ 0.49
HDAC6-205ENST00000423941 KIR2DS5A0A0G2JLQ3 304 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 A0A0G2JNG1 304 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 CPED1A4D0V7 1026 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 KIR2DS3K7RE56 304 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 OPA1O60313 960 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 XRCC1P18887 633 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-205ENST00000423941 IDSP22304 550 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 PPARGP37231 505 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-205ENST00000423941 TTPAP49638 278 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 MAZP56270 477 aaKnown RBP18.13■□□□□ 0.49
HDAC6-205ENST00000423941 KIR2DS5Q14953 304 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 DNAJC21Q5F1R6 531 aaKnown RBP18.13■□□□□ 0.49
HDAC6-205ENST00000423941 AARS2Q5JTZ9 985 aaKnown RBP18.13■□□□□ 0.49
HDAC6-205ENST00000423941 CDCP2Q5VXM1 449 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 CASC4Q6P4E1 433 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 DHRS13Q6UX07 377 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 FAM83HQ6ZRV2 1179 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-205ENST00000423941 CCNJLQ8IV13 435 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 PDIK1LQ8N165 341 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 CHCHD4Q8N4Q1 142 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 MNS1Q8NEH6 495 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 SLC37A2Q8TED4 501 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 WDR83Q9BRX9 315 aaKnown RBP18.13■□□□□ 0.49
HDAC6-205ENST00000423941 LRRC1Q9BTT6 524 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 P2RY12Q9H244 342 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 SARS2Q9NP81 518 aaKnown RBP18.13■□□□□ 0.49
HDAC6-205ENST00000423941 PRDM8Q9NQV8 689 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 SCHIP1Q9P0W5 487 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-205ENST00000423941 LRIT1Q9P2V4 623 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 UTP11Q9Y3A2 253 aaKnown RBP18.13■□□□□ 0.49
HDAC6-205ENST00000423941 RNF215Q9Y6U7 377 aa18.13■□□□□ 0.49
HDAC6-205ENST00000423941 QSOX1O00391 747 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 NTN3O00634 580 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-205ENST00000423941 PPM1DO15297 605 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 OR1I1O60431 355 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 BANF1O75531 89 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 TTC4O95801 387 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 TOP3BO95985 862 aaKnown RBP18.12■□□□□ 0.49
HDAC6-205ENST00000423941 POLBP06746 335 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 SLC2A4P14672 509 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 PGAM1P18669 254 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 PAMP19021 973 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 OGNP20774 298 aaKnown RBP18.12■□□□□ 0.49
HDAC6-205ENST00000423941 KCNA4P22459 653 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 GPR3P46089 330 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 ADARP55265 1226 aaKnown RBP18.12■□□□□ 0.49
HDAC6-205ENST00000423941 ARL4CP56559 192 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 UBE2IP63279 158 aaKnown RBP18.12■□□□□ 0.49
HDAC6-205ENST00000423941 INSM1Q01101 510 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-205ENST00000423941 SQSTM1Q13501 440 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 NFE2L1Q14494 772 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 HIF1AQ16665 826 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 PLA2G4EQ3MJ16 856 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 NEPROQ6NW34 567 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 TMPRSS12Q86WS5 348 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 ART4Q93070 314 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 CCDC74AQ96AQ1 378 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 ZNF669Q96BR6 464 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-205ENST00000423941 CCM2Q9BSQ5 444 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 RAB17Q9H0T7 212 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 ZNF624Q9P2J8 865 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-205ENST00000423941 DNAJC16Q9Y2G8 782 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 WDR37Q9Y2I8 494 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 MAD1L1Q9Y6D9 718 aa18.12■□□□□ 0.49
HDAC6-205ENST00000423941 B4GAT1O43505 415 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 RPS3P23396 243 aaKnown RBP eCLIP18.11■□□□□ 0.49
HDAC6-205ENST00000423941 SLC19A1P41440 591 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 FOXK2Q01167 660 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 CLCA4Q14CN2 919 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 BBS9Q3SYG4 887 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 CAPRIN2Q6IMN6 1127 aaKnown RBP18.11■□□□□ 0.49
HDAC6-205ENST00000423941 MRNIPQ6NTE8 343 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 CENPUQ71F23 418 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 LDB1Q86U70 411 aaPredicted RBP18.11■□□□□ 0.49
HDAC6-205ENST00000423941 CILP2Q8IUL8 1156 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 LMNTD2Q8IXW0 634 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 NOA1Q8NC60 698 aaKnown RBP18.11■□□□□ 0.49
HDAC6-205ENST00000423941 WDR48Q8TAF3 677 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 HM13Q8TCT9 377 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 MAPK15Q8TD08 544 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 CCDC3Q9BQI4 270 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 PHACTR1Q9C0D0 580 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 OSGEPL1Q9H4B0 414 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 UCK1Q9HA47 277 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 ACSL5Q9ULC5 683 aa18.11■□□□□ 0.49
HDAC6-205ENST00000423941 UNC13CQ8NB66 2214 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 CTAGE15A4D2H0 777 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 PRMT5O14744 637 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-205ENST00000423941 HYAL3O43820 417 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms