RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 HAUS5O94927 633 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 S1PR4O95977 384 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 AHSGP02765 367 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 CEACAM5P06731 702 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 ANXA6P08133 673 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 GSTM1P09488 218 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 ACTR1BP42025 376 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 HALP42357 657 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 CTSKP43235 329 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 PRLHRP49683 370 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 HK3P52790 923 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 ACTR1AP61163 376 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 IL9RQ01113 521 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 GSTM4Q03013 218 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 SPEM2Q0P670 501 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 LRP8Q14114 963 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 KRT33BQ14525 404 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 KIF19Q2TAC6 998 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 BCL7AQ4VC05 210 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 KHDC1Q4VXA5 237 aaKnown RBP8.34□□□□□ -1.07
TRIM48-201ENST00000417545 PRRT3Q5FWE3 981 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 CNSTQ6PJW8 725 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 SLC30A9Q6PML9 568 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 RAPH1Q70E73 1250 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 OTOAQ7RTW8 1153 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 AMZ2Q86W34 360 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 CNPY4Q8N129 248 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 KRT222Q8N1A0 295 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 SLC22A18ASQ8N1D0 253 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 BEND7Q8N7W2 519 aaPredicted RBP8.34□□□□□ -1.07
TRIM48-201ENST00000417545 GOLGA6L1Q8N7Z2 621 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 PNPLA1Q8N8W4 532 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 C1orf216Q8TAB5 229 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 HM13Q8TCT9 377 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 NAT14Q8WUY8 206 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 TMEM159Q96B96 161 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 FAM136AQ96C01 138 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 ELF4Q99607 663 aaPredicted RBP8.34□□□□□ -1.07
TRIM48-201ENST00000417545 NDNQ99608 321 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 RBBP8Q99708 897 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 CENPHQ9H3R5 247 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 RHOJQ9H4E5 214 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 ERVMER34-1Q9H9K5 563 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 FSCN3Q9NQT6 498 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 KLC4Q9NSK0 619 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 TSR3Q9UJK0 312 aaKnown RBP8.34□□□□□ -1.07
TRIM48-201ENST00000417545 TMPRSS11EQ9UL52 423 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 SLC39A10Q9ULF5 831 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 KCNK6Q9Y257 313 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 PLAAQ9Y263 795 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 TDRD6O60522 2096 aaKnown RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 IGLV3-16A0A075B6K0 115 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 NEMP2A6NFY4 417 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 MGAT4DA6NG13 374 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 CXorf49A8MYA2 514 aaPredicted RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 IFRD1O00458 451 aaPredicted RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 AQP9O43315 295 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 FOXD2O60548 495 aaPredicted RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 KCNJ13O60928 360 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 NIPSNAP2O75323 286 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 POP7O75817 140 aaKnown RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 CSF2P04141 144 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 SLC35G4P0C7Q5 338 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 MYZAPP0CAP1 466 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 HOXB1P14653 301 aaPredicted RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 SLC2A4P14672 509 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 NME1P15531 152 aaKnown RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 STMN1P16949 149 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 ENGP17813 658 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 KRT15P19012 456 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 IDSP22304 550 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 CNTFP26441 200 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 CA5AP35218 305 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 SLCO1A2P46721 670 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 RGS4P49798 205 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 SERPINB8P50452 374 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 CTSCP53634 463 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 LIMK2P53671 638 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 B4GALNT1Q00973 533 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 EIF2B5Q13144 721 aaKnown RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 C1orf61Q13536 156 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 USP10Q14694 798 aaKnown RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 SUZ12Q15022 739 aaKnown RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 SEPT7Q16181 437 aaKnown RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 HLA-BQ31612 363 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 KRT71Q3SY84 523 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 PYCR3Q53H96 274 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 TAF1BQ53T94 588 aaPredicted RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 ZNF789Q5FWF6 425 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 PRAMEF14Q5SWL7 426 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 TPRG1LQ5T0D9 272 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 UBAP2Q5T6F2 1119 aaKnown RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 HECTD2Q5U5R9 776 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 TCEAL6Q6IPX3 200 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 GALNT7Q86SF2 657 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 CROCCP2Q86T23 111 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 SPATS2Q86XZ4 545 aaKnown RBP8.33□□□□□ -1.08
TRIM48-201ENST00000417545 TRIM48Q8IWZ4 208 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 CFAP206Q8IYR0 622 aa8.33□□□□□ -1.08
TRIM48-201ENST00000417545 MREGQ8N565 214 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms