RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 KMOO15229 486 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 DUX1O43812 170 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 CPNE6O95741 557 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 APRTP07741 180 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 PNLIPP16233 465 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 MSH3P20585 1137 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 MSNP26038 577 aaKnown RBP10.03□□□□□ -0.8
HDLBP-206ENST00000417540 ACRV1P26436 265 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 PRLHRP49683 370 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 CLCNKAP51800 687 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 CLN3Q13286 438 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 BIRC2Q13490 618 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 ITGA9Q13797 1035 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 LONRF2Q1L5Z9 754 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 ZRANB3Q5FWF4 1079 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 LDLRAP1Q5SW96 308 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 CERS6Q6ZMG9 384 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 PPP1R21Q6ZMI0 780 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 CLEC14AQ86T13 490 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 LDB1Q86U70 411 aaPredicted RBP10.03□□□□□ -0.8
HDLBP-206ENST00000417540 PDZD3Q86UT5 571 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 SERPINA9Q86WD7 417 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 AGGF1Q8N302 714 aaeCLIP10.03□□□□□ -0.8
HDLBP-206ENST00000417540 MPP5Q8N3R9 675 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 FBXO39Q8N4B4 442 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 WDR36Q8NI36 951 aaKnown RBP10.03□□□□□ -0.8
HDLBP-206ENST00000417540 BRSK1Q8TDC3 778 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 PPM1MQ96MI6 270 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 CTRCQ99895 268 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 WWP1Q9H0M0 922 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 ARNT2Q9HBZ2 717 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 SARS2Q9NP81 518 aaKnown RBP10.03□□□□□ -0.8
HDLBP-206ENST00000417540 CASS4Q9NQ75 786 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 NLE1Q9NVX2 485 aaPredicted RBP10.03□□□□□ -0.8
HDLBP-206ENST00000417540 WDR70Q9NW82 654 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 SYBUQ9NX95 663 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 MARCH4Q9P2E8 410 aaPredicted RBP10.03□□□□□ -0.8
HDLBP-206ENST00000417540 TCAF1Q9Y4C2 921 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 PCDHGA8Q9Y5G5 932 aa10.03□□□□□ -0.8
HDLBP-206ENST00000417540 IGLV3-16A0A075B6K0 115 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 TEX51A0A1B0GUA7 166 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 MROH6A6NGR9 719 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 LILRA5A6NI73 299 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 C2orf81A6NN90 581 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 KIF1CO43896 1103 aaKnown RBP10.02□□□□□ -0.81
HDLBP-206ENST00000417540 VEGFDO43915 354 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 OR1I1O60431 355 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 POP7O75817 140 aaKnown RBP10.02□□□□□ -0.81
HDLBP-206ENST00000417540 SUN1O94901 812 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 GOT2P00505 430 aaKnown RBP10.02□□□□□ -0.81
HDLBP-206ENST00000417540 ITGA2BP08514 1039 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 ITGB6P18564 788 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 ITGALP20701 1170 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 MGAT1P26572 445 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 ARNTP27540 789 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 SLC5A2P31639 672 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 CAPZBP47756 277 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 SESN2P58004 480 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-206ENST00000417540 DMPKQ09013 629 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 BCL7AQ4VC05 210 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 FBXO38Q6PIJ6 1188 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 CES3Q6UWW8 571 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 TMEM26Q6ZUK4 368 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 SNX20Q7Z614 316 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 ZFAND4Q86XD8 727 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 FAM129CQ86XR2 697 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 CLDN19Q8N6F1 224 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 CCDC89Q8N998 374 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 LMNTD1Q8N9Z9 388 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 OR6C4Q8NGE1 309 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 WDR48Q8TAF3 677 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 ZNF398Q8TD17 642 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 KCNE4Q8WWG9 221 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 FCRL3Q96P31 734 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-206ENST00000417540 TGM7Q96PF1 710 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 FERMT1Q9BQL6 677 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 COG4Q9H9E3 785 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 IMP3Q9NV31 184 aaKnown RBP10.02□□□□□ -0.81
HDLBP-206ENST00000417540 SIDT1Q9NXL6 827 aaKnown RBP10.02□□□□□ -0.81
HDLBP-206ENST00000417540 SETXQ7Z333 2677 aaKnown RBP10.02□□□□□ -0.81
HDLBP-206ENST00000417540 PCSK5Q92824 1860 aa10.02□□□□□ -0.81
HDLBP-206ENST00000417540 GCN1Q92616 2671 aaKnown RBP10.01□□□□□ -0.81
HDLBP-206ENST00000417540 EFCAB7A8K855 629 aa10.01□□□□□ -0.81
HDLBP-206ENST00000417540 AGAP14A8MT82 685 aa10.01□□□□□ -0.81
HDLBP-206ENST00000417540 GPR89AB7ZAQ6 455 aa10.01□□□□□ -0.81
HDLBP-206ENST00000417540 H7C0S8 307 aa10.01□□□□□ -0.81
HDLBP-206ENST00000417540 BANF1O75531 89 aa10.01□□□□□ -0.81
HDLBP-206ENST00000417540 CRTAMO95727 393 aa10.01□□□□□ -0.81
HDLBP-206ENST00000417540 JMJD7P0C870 316 aa10.01□□□□□ -0.81
HDLBP-206ENST00000417540 GPR89BP0CG08 455 aa10.01□□□□□ -0.81
HDLBP-206ENST00000417540 FGF3P11487 239 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-206ENST00000417540 MTHFD1P11586 935 aaKnown RBP10.01□□□□□ -0.81
HDLBP-206ENST00000417540 ACTN2P35609 894 aa10.01□□□□□ -0.81
HDLBP-206ENST00000417540 FDFT1P37268 417 aa10.01□□□□□ -0.81
HDLBP-206ENST00000417540 LMAN1P49257 510 aa10.01□□□□□ -0.81
HDLBP-206ENST00000417540 LIMK2P53671 638 aa10.01□□□□□ -0.81
HDLBP-206ENST00000417540 CXADRP78310 365 aa10.01□□□□□ -0.81
HDLBP-206ENST00000417540 SH3BP2P78314 561 aa10.01□□□□□ -0.81
HDLBP-206ENST00000417540 KCNJ11Q14654 390 aa10.01□□□□□ -0.81
HDLBP-206ENST00000417540 RPE65Q16518 533 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms