RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 DUPD1Q68J44 220 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 DHRS13Q6UX07 377 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 WASH2PQ6VEQ5 465 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 SLC9B2Q86UD5 537 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 GALNT15Q8N3T1 639 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 BEND7Q8N7W2 519 aaPredicted RBP22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 CEP112Q8N8E3 955 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 WDR48Q8TAF3 677 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 TCF12Q99081 682 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 EBNA1BP2Q99848 306 aaKnown RBP22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 CCM2Q9BSQ5 444 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 WASH6PQ9NQA3 447 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 PRDM8Q9NQV8 689 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 NDUFS3O75489 264 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 OR56A5P0C7T3 313 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 PBLDP30039 288 aaPredicted RBP22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 ARCN1P48444 511 aaKnown RBP22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 CAV1Q03135 178 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 FOXC1Q12948 553 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 THOC5Q13769 683 aaKnown RBP22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 LONRF1Q17RB8 773 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 AGAP9Q5VTM2 703 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 ZNF449Q6P9G9 518 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 ABRAXAS1Q6UWZ7 409 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 MICALCLQ6ZW33 695 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 RAB44Q7Z6P3 723 aaPredicted RBP22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 SFRP1Q8N474 314 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 MMGT1Q8N4V1 131 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 CLDN19Q8N6F1 224 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 GPR150Q8NGU9 434 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 GABPB2Q8TAK5 448 aaPredicted RBP22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 FCRL3Q96P31 734 aaPredicted RBP22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 ACSL5Q9ULC5 683 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 FAM169AQ9Y6X4 670 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 SPTBN2O15020 2390 aa22.69■■□□□ 1.22
SMARCB1-205ENST00000417137 KMT2BQ9UMN6 2715 aaPredicted RBP22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 TRBV23OR9-2A0A075B6M9 112 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 A6NCN8 305 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 PRR19A6NJB7 356 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 SGTAO43765 313 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 FTH1P02794 183 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 ARNTP27540 789 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 HALP42357 657 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 DRG2P55039 364 aaKnown RBP22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 MAZP56270 477 aaKnown RBP22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 PERM1Q5SV97 790 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 RNF187Q5TA31 235 aaPredicted RBP22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 METRNLQ641Q3 311 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 NEPROQ6NW34 567 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 TMPRSS12Q86WS5 348 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 SFTPA2Q8IWL1 248 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 LMNTD2Q8IXW0 634 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 AGGF1Q8N302 714 aaeCLIP22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 CHCHD4Q8N4Q1 142 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 CALML6Q8TD86 181 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 CCDC74AQ96AQ1 378 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 SH3KBP1Q96B97 665 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 CCDC3Q9BQI4 270 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 TSSK1BQ9BXA7 367 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 MARCH4Q9P2E8 410 aaPredicted RBP22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 VPS9D1Q9Y2B5 631 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 RNF215Q9Y6U7 377 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 MYLKQ15746 1914 aa22.68■■□□□ 1.22
SMARCB1-205ENST00000417137 ZCWPW2A0A1B0GU75 182 aa22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 OPA1O60313 960 aa22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 EML2O95834 649 aa22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 RPL10P27635 214 aaKnown RBP22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 FASLGP48023 281 aa22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 NFE2L1Q14494 772 aa22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 SEMA3AQ14563 771 aa22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 SEPT7Q16181 437 aaKnown RBP22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 MSS51Q4VC12 460 aa22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 SPANXN3Q5MJ09 141 aa22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 LRRC6Q86X45 466 aa22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 CFAP206Q8IYR0 622 aa22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 HM13Q8TCT9 377 aa22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 SLC37A2Q8TED4 501 aa22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 NAT14Q8WUY8 206 aa22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 PATE1Q8WXA2 126 aa22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 CCDC97Q96F63 343 aaPredicted RBP22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 LRRC1Q9BTT6 524 aa22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 SARS2Q9NP81 518 aaKnown RBP22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 C20orf96Q9NUD7 363 aaPredicted RBP22.67■■□□□ 1.22
SMARCB1-205ENST00000417137 PRMT5O14744 637 aaPredicted RBP22.66■■□□□ 1.22
SMARCB1-205ENST00000417137 OR1I1O60431 355 aa22.66■■□□□ 1.22
SMARCB1-205ENST00000417137 KRT37O76014 449 aa22.66■■□□□ 1.22
SMARCB1-205ENST00000417137 XRCC1P18887 633 aaPredicted RBP22.66■■□□□ 1.22
SMARCB1-205ENST00000417137 OGNP20774 298 aaKnown RBP22.66■■□□□ 1.22
SMARCB1-205ENST00000417137 ELK3P41970 407 aa22.66■■□□□ 1.22
SMARCB1-205ENST00000417137 GPR3P46089 330 aa22.66■■□□□ 1.22
SMARCB1-205ENST00000417137 SMAD1Q15797 465 aaKnown RBP22.66■■□□□ 1.22
SMARCB1-205ENST00000417137 GLE1Q53GS7 698 aaKnown RBP22.66■■□□□ 1.22
SMARCB1-205ENST00000417137 CENPUQ71F23 418 aa22.66■■□□□ 1.22
SMARCB1-205ENST00000417137 LDB1Q86U70 411 aaPredicted RBP22.66■■□□□ 1.22
SMARCB1-205ENST00000417137 TRIM48Q8IWZ4 208 aa22.66■■□□□ 1.22
SMARCB1-205ENST00000417137 TRIM56Q9BRZ2 755 aaKnown RBP22.66■■□□□ 1.22
SMARCB1-205ENST00000417137 ZC3H7BQ9UGR2 993 aaKnown RBP22.66■■□□□ 1.22
SMARCB1-205ENST00000417137 PRSS21Q9Y6M0 314 aa22.66■■□□□ 1.22
SMARCB1-205ENST00000417137 GOLGA8KD6RF30 607 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms