RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 PCDHGA4Q9Y5G9 962 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 AGAP14A8MT82 685 aa17.54■□□□□ 0.4
CPNE1-210ENST00000416778 DDX3YO15523 660 aaKnown RBP17.54■□□□□ 0.4
CPNE1-210ENST00000416778 AMD1P17707 334 aa17.54■□□□□ 0.4
CPNE1-210ENST00000416778 GFERP55789 205 aa17.54■□□□□ 0.4
CPNE1-210ENST00000416778 KIF5AQ12840 1032 aa17.54■□□□□ 0.4
CPNE1-210ENST00000416778 METRNLQ641Q3 311 aa17.54■□□□□ 0.4
CPNE1-210ENST00000416778 FAM83HQ6ZRV2 1179 aaPredicted RBP17.54■□□□□ 0.4
CPNE1-210ENST00000416778 TRIM48Q8IWZ4 208 aa17.54■□□□□ 0.4
CPNE1-210ENST00000416778 RBM12BQ8IXT5 1001 aaKnown RBP17.54■□□□□ 0.4
CPNE1-210ENST00000416778 MED8Q96G25 268 aa17.54■□□□□ 0.4
CPNE1-210ENST00000416778 TEFMQ96QE5 360 aaKnown RBP17.54■□□□□ 0.4
CPNE1-210ENST00000416778 CTRCQ99895 268 aa17.54■□□□□ 0.4
CPNE1-210ENST00000416778 APMAPQ9HDC9 416 aa17.54■□□□□ 0.4
CPNE1-210ENST00000416778 POT1Q9NUX5 634 aa17.54■□□□□ 0.4
CPNE1-210ENST00000416778 IMPACTQ9P2X3 320 aa17.54■□□□□ 0.4
CPNE1-210ENST00000416778 PACSIN2Q9UNF0 486 aaPredicted RBP17.54■□□□□ 0.4
CPNE1-210ENST00000416778 MN1Q10571 1320 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-210ENST00000416778 MACROD2A1Z1Q3 448 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 OR2AG2A6NM03 316 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 TOX3O15405 576 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-210ENST00000416778 CAPN5O15484 640 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-210ENST00000416778 SRP72O76094 671 aaKnown RBP17.53■□□□□ 0.4
CPNE1-210ENST00000416778 STK10O94804 968 aaKnown RBP17.53■□□□□ 0.4
CPNE1-210ENST00000416778 ITGB2P05107 769 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 ANKRD34CP0C6C1 535 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 CYP4F2P78329 520 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 KLF1Q13351 362 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-210ENST00000416778 GPR18Q14330 331 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 SPARCL1Q14515 664 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 RPE65Q16518 533 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 PARP6Q2NL67 630 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 KCTD11Q693B1 232 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 XKR5Q6UX68 686 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 TIPARPQ7Z3E1 657 aaKnown RBP17.53■□□□□ 0.4
CPNE1-210ENST00000416778 ZNF605Q86T29 641 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 SYCE1Q8N0S2 351 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 CXorf40BQ96DE9 158 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 ZNF514Q96K75 400 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-210ENST00000416778 C19orf43Q9BQ61 176 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 ZPBPQ9BS86 351 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 SLC12A9Q9BXP2 914 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 ZCCHC2Q9C0B9 1178 aaKnown RBP17.53■□□□□ 0.4
CPNE1-210ENST00000416778 ZMYND15Q9H091 742 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 ASB8Q9H765 288 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 EPHA6Q9UF33 1036 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 FKBPLQ9UIM3 349 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 SDK2Q58EX2 2172 aa17.53■□□□□ 0.4
CPNE1-210ENST00000416778 MIF4GDA9UHW6 222 aaKnown RBP17.52■□□□□ 0.4
CPNE1-210ENST00000416778 SGTAO43765 313 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 RAD1O60671 282 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 PRAMEF1O95521 474 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 METTL18O95568 372 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 CRTAMO95727 393 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 FTCDO95954 541 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 MSH3P20585 1137 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 CDC25BP30305 580 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 LEPRP48357 1165 aaKnown RBP17.52■□□□□ 0.4
CPNE1-210ENST00000416778 ATP1A2P50993 1020 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 NFE2L1Q14494 772 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 FNBP1LQ5T0N5 605 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 CEACAM20Q6UY09 585 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 CACNA2D3Q8IZS8 1091 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 UBL4BQ8N7F7 174 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 BEND7Q8N7W2 519 aaPredicted RBP17.52■□□□□ 0.4
CPNE1-210ENST00000416778 FAM71DQ8N9W8 422 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 ZSCAN1Q8NBB4 408 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 TTC13Q8NBP0 860 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 OR13C4Q8NGS5 318 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 EXTL1Q92935 676 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 HES6Q96HZ4 224 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 TGM7Q96PF1 710 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 PPP1R2P1Q96PQ5 205 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 TBL1YQ9BQ87 522 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 DESI2Q9BSY9 194 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 RAB33BQ9H082 229 aa17.52■□□□□ 0.4
CPNE1-210ENST00000416778 SIDT1Q9NXL6 827 aaKnown RBP17.52■□□□□ 0.4
CPNE1-210ENST00000416778 R3HDM2Q9Y2K5 976 aaKnown RBP17.52■□□□□ 0.4
CPNE1-210ENST00000416778 TCRBV7S2A1N4TA0A589 114 aa17.51■□□□□ 0.39
CPNE1-210ENST00000416778 MGAT4DA6NG13 374 aa17.51■□□□□ 0.39
CPNE1-210ENST00000416778 POLR1CO15160 346 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-210ENST00000416778 LDB2O43679 373 aa17.51■□□□□ 0.39
CPNE1-210ENST00000416778 KIF1CO43896 1103 aaKnown RBP17.51■□□□□ 0.39
CPNE1-210ENST00000416778 ZNF189O75820 626 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-210ENST00000416778 MAP4P27816 1152 aaKnown RBP17.51■□□□□ 0.39
CPNE1-210ENST00000416778 HALP42357 657 aa17.51■□□□□ 0.39
CPNE1-210ENST00000416778 PDE1BQ01064 536 aa17.51■□□□□ 0.39
CPNE1-210ENST00000416778 TBR1Q16650 682 aa17.51■□□□□ 0.39
CPNE1-210ENST00000416778 LONRF2Q1L5Z9 754 aa17.51■□□□□ 0.39
CPNE1-210ENST00000416778 DET1Q7L5Y6 550 aa17.51■□□□□ 0.39
CPNE1-210ENST00000416778 IL22RA1Q8N6P7 574 aa17.51■□□□□ 0.39
CPNE1-210ENST00000416778 SPC24Q8NBT2 197 aa17.51■□□□□ 0.39
CPNE1-210ENST00000416778 SLC35B2Q8TB61 432 aa17.51■□□□□ 0.39
CPNE1-210ENST00000416778 NAT14Q8WUY8 206 aa17.51■□□□□ 0.39
CPNE1-210ENST00000416778 KLHL6Q8WZ60 621 aa17.51■□□□□ 0.39
CPNE1-210ENST00000416778 RSC1A1Q92681 617 aa17.51■□□□□ 0.39
CPNE1-210ENST00000416778 INSM2Q96T92 566 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-210ENST00000416778 FEZ2Q9UHY8 353 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-210ENST00000416778 PSMD13Q9UNM6 376 aa17.51■□□□□ 0.39
CPNE1-210ENST00000416778 TMEM184BQ9Y519 407 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms