RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 MFRPQ9BY79 579 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 ZCCHC2Q9C0B9 1178 aaKnown RBP9.82□□□□□ -0.84
MDC1-202ENST00000416571 NAT10Q9H0A0 1025 aaKnown RBP9.82□□□□□ -0.84
MDC1-202ENST00000416571 THAP2Q9H0W7 228 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 AKIRIN1Q9H9L7 192 aaPredicted RBP9.82□□□□□ -0.84
MDC1-202ENST00000416571 FANCEQ9HB96 536 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 MAGEE1Q9HCI5 957 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 MLXIPLQ9NP71 852 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 SOHLH2Q9NX45 425 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 SSU72P8A0A1W2PR75 194 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 MMP2P08253 660 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 RNF224P0DH78 156 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 LPOP22079 712 aaPredicted RBP9.81□□□□□ -0.84
MDC1-202ENST00000416571 RRADP55042 308 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 GSDMDP57764 484 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 TUBB4BP68371 445 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 CDK18Q07002 472 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 TMEM115Q12893 351 aaPredicted RBP9.81□□□□□ -0.84
MDC1-202ENST00000416571 MRPL49Q13405 166 aaKnown RBP9.81□□□□□ -0.84
MDC1-202ENST00000416571 XRCC4Q13426 336 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 TUBB2AQ13885 445 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 ATP13A4Q4VNC1 1196 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 ZNF787Q6DD87 383 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 TMC3Q7Z5M5 1100 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 NT5DC3Q86UY8 548 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 AMZ2Q86W34 360 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 OOSP2Q86WS3 158 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 GPR150Q8NGU9 434 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 OR8K5Q8NH50 307 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 BRSK1Q8TDC3 778 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 CPT1BQ92523 772 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 PNPLA2Q96AD5 504 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 VPS35Q96QK1 796 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 TUBB2BQ9BVA1 445 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 XPO4Q9C0E2 1151 aaKnown RBP9.81□□□□□ -0.84
MDC1-202ENST00000416571 HSD3B7Q9H2F3 369 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 CBX8Q9HC52 389 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 KCND1Q9NSA2 647 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 IMP3Q9NV31 184 aaKnown RBP9.81□□□□□ -0.84
MDC1-202ENST00000416571 HRASLS2Q9NWW9 162 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 GPR83Q9NYM4 423 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 SEMA5BQ9P283 1151 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 PSMD13Q9UNM6 376 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 WDR37Q9Y2I8 494 aa9.81□□□□□ -0.84
MDC1-202ENST00000416571 BZW2Q9Y6E2 419 aaKnown RBP9.81□□□□□ -0.84
MDC1-202ENST00000416571 CACNA1DQ01668 2161 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 OR5K3A6NET4 321 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 A6NL46 340 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 ZNF185O15231 689 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 CEACAM4O75871 244 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 ZBTB11O95625 1053 aaPredicted RBP9.8□□□□□ -0.84
MDC1-202ENST00000416571 BPIP17213 487 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 COL8A1P27658 744 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 TNNT3P45378 269 aaPredicted RBP9.8□□□□□ -0.84
MDC1-202ENST00000416571 ARSEP51690 589 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 IFI35P80217 286 aaPredicted RBP9.8□□□□□ -0.84
MDC1-202ENST00000416571 PPIDQ08752 370 aaKnown RBP9.8□□□□□ -0.84
MDC1-202ENST00000416571 AP1B1Q10567 949 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 ZBTB17Q13105 803 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 GPS2Q13227 327 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 ELOAQ14241 798 aaKnown RBP9.8□□□□□ -0.84
MDC1-202ENST00000416571 NFKBIBQ15653 356 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 GPR19Q15760 415 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 RPE65Q16518 533 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 ATP13A5Q4VNC0 1218 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 KHDC1Q4VXA5 237 aaKnown RBP9.8□□□□□ -0.84
MDC1-202ENST00000416571 IZUMO3Q5VZ72 239 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 SLC6A19Q695T7 634 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 CERS6Q6ZMG9 384 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 C11orf96Q7Z7L8 435 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 IQCKQ8N0W5 287 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 D2HGDHQ8N465 521 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 ENDOVQ8N8Q3 282 aaKnown RBP9.8□□□□□ -0.84
MDC1-202ENST00000416571 TMEM102Q8N9M5 508 aaPredicted RBP9.8□□□□□ -0.84
MDC1-202ENST00000416571 FDCSPQ8NFU4 85 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.8□□□□□ -0.84
MDC1-202ENST00000416571 CLIP3Q96DZ5 547 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 C5orf34Q96MH7 638 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 AGAP3Q96P47 875 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 TRIB3Q96RU7 358 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 CEP41Q9BYV8 373 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 SLC7A5P2Q9GIP4 190 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 CHST8Q9H2A9 424 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 BPIFA1Q9NP55 256 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 LMBRD1Q9NUN5 540 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 HEY1Q9Y5J3 304 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 MED13Q9UHV7 2174 aa9.8□□□□□ -0.84
MDC1-202ENST00000416571 OR2AG2A6NM03 316 aa9.79□□□□□ -0.84
MDC1-202ENST00000416571 MEN1O00255 615 aa9.79□□□□□ -0.84
MDC1-202ENST00000416571 MAP3K7O43318 606 aa9.79□□□□□ -0.84
MDC1-202ENST00000416571 POP7O75817 140 aaKnown RBP9.79□□□□□ -0.84
MDC1-202ENST00000416571 NDST3O95803 873 aa9.79□□□□□ -0.84
MDC1-202ENST00000416571 CYP1A2P05177 515 aa9.79□□□□□ -0.84
MDC1-202ENST00000416571 RAB40ALP0C0E4 278 aa9.79□□□□□ -0.84
MDC1-202ENST00000416571 MTHFD1P11586 935 aaKnown RBP9.79□□□□□ -0.84
MDC1-202ENST00000416571 PBLDP30039 288 aaPredicted RBP9.79□□□□□ -0.84
MDC1-202ENST00000416571 DCTP40126 519 aa9.79□□□□□ -0.84
MDC1-202ENST00000416571 VAV2P52735 878 aa9.79□□□□□ -0.84
MDC1-202ENST00000416571 DMPKQ09013 629 aa9.79□□□□□ -0.84
MDC1-202ENST00000416571 SLC10A2Q12908 348 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms