RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 TTLL3Q9Y4R7 772 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 PCDHGA5Q9Y5G8 931 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 HEY1Q9Y5J3 304 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 CACNA1EQ15878 2313 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 LRP4O75096 1905 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 SCN8AQ9UQD0 1980 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 AKAP13Q12802 2813 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 ASCC3Q8N3C0 2202 aaKnown RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 A0A1B0GTW7 788 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 ZSCAN5CA6NGD5 496 aaPredicted RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 C3orf70A6NLC5 250 aaPredicted RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 C16orf96A6NNT2 1141 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 A8MX80 341 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 GOLGA6L6A8MZA4 724 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 F5H423 210 aaPredicted RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 BCAT2O15382 392 aaPredicted RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 SLC31A1O15431 190 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 LRP3O75074 770 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 IPO7O95373 1038 aaKnown RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 WNT1P04628 370 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 RNASE1P07998 156 aaKnown RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 SERPINF2P08697 491 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 KRT10P13645 584 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 ADRB3P13945 408 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 GNSP15586 552 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 XPAP23025 273 aaPredicted RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 ITGB7P26010 798 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 PEX2P28328 305 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 SSTR4P31391 388 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 SERPINB6P35237 376 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 ARHGAP25P42331 645 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 HCAR3P49019 387 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 VAV2P52735 878 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 ATXN3P54252 364 aaPredicted RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 DSC2Q02487 901 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 IL10RBQ08334 325 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 SLC20A2Q08357 652 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 SLC10A2Q12908 348 aaPredicted RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 NFATC3Q12968 1075 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 GRIK2Q13002 908 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 ZNF235Q14590 738 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 PDK2Q15119 407 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 PTPRRQ15256 657 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 CNN3Q15417 329 aaKnown RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 DUOXA1Q1HG43 343 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 SKIDA1Q1XH10 827 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 PLEKHN1Q494U1 663 aaPredicted RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 ODF2Q5BJF6 829 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 SPDYCQ5MJ68 293 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 VASNQ6EMK4 673 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 AADACL2Q6P093 401 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 MFSD7Q6UXD7 560 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 CD300LDQ6UXZ3 194 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 GDPD4Q6W3E5 623 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 ZSWIM9Q86XI8 627 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 CAMK1DQ8IU85 385 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 CCDC50Q8IVM0 306 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 RHOT1Q8IXI2 618 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 PGBD5Q8N414 524 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 MINDY1Q8N5J2 469 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 CCNYQ8ND76 341 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 TMIEQ8NEW7 156 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 CADM4Q8NFZ8 388 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 FAM71BQ8TC56 605 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 PDCD6IPQ8WUM4 868 aaKnown RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 ALG3Q92685 438 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 KRT35Q92764 455 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 ISG20Q96AZ6 181 aaKnown RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 PPP1R16AQ96I34 528 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 SERAC1Q96JX3 654 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 HIST1H2AHQ96KK5 128 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 RNF157Q96PX1 679 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 SMIM14Q96QK8 99 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 HIST1H2AJQ99878 128 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 FAM118BQ9BPY3 351 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 ZNF670Q9BS34 389 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 WRAP53Q9BUR4 548 aaKnown RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 OR10A5Q9H207 317 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 RETREG1Q9H6L5 497 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 GRPEL1Q9HAV7 217 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 IL21RQ9HBE5 538 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 NT5MQ9NPB1 228 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 TMEM9BQ9NQ34 198 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 SEPT10Q9P0V9 454 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 KLHL14Q9P2G3 628 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 SAE1Q9UBE0 346 aaPredicted RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 PACSIN2Q9UNF0 486 aaPredicted RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 ZFR2Q9UPR6 939 aaKnown RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 WASF3Q9UPY6 502 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 PCDHB1Q9Y5F3 818 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 ALG6Q9Y672 507 aa4.9□□□□□ -1.63
VPS41-205ENST00000414632 CFAP20Q9Y6A4 193 aaKnown RBP4.9□□□□□ -1.63
VPS41-205ENST00000414632 A0A0U1RQS6 177 aa4.89□□□□□ -1.63
VPS41-205ENST00000414632 A0A1W2PPC4 97 aa4.89□□□□□ -1.63
VPS41-205ENST00000414632 GRID2IPA4D2P6 1211 aa4.89□□□□□ -1.63
VPS41-205ENST00000414632 CFAP69A5D8W1 941 aa4.89□□□□□ -1.63
VPS41-205ENST00000414632 GOLGA6L3A6NEY3 463 aa4.89□□□□□ -1.63
VPS41-205ENST00000414632 IGLON5A6NGN9 336 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms