RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 LRRC32Q14392 662 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 ASTE1Q2TB18 679 aaPredicted RBP17.09■□□□□ 0.33
PHRF1-202ENST00000413872 DEF8Q6ZN54 512 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 CACTIN-AS1Q8N1I8 211 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 IGSF21Q96ID5 467 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 SEC14L3Q9UDX4 400 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 C10orf71Q711Q0 1435 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 MCIDASD6RGH6 385 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 PPEF2O14830 753 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 ZNF623O75123 536 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 RB1P06400 928 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 MTHFRP42898 656 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 TRAF3Q13114 568 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 IL23RQ5VWK5 629 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 ZNF776Q68DI1 518 aaPredicted RBP17.09■□□□□ 0.33
PHRF1-202ENST00000413872 NCBP2-AS2Q69YL0 99 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 OLFML1Q6UWY5 402 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 PIK3C3Q8NEB9 887 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 ZNF563Q8TA94 476 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 C12orf66Q96MD2 445 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 TMEM27Q9HBJ8 222 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 CCNB1IP1Q9NPC3 277 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 ERGIC3Q9Y282 383 aa17.09■□□□□ 0.33
PHRF1-202ENST00000413872 UGT2B17O75795 530 aa17.08■□□□□ 0.33
PHRF1-202ENST00000413872 NT5EP21589 574 aa17.08■□□□□ 0.33
PHRF1-202ENST00000413872 MAT2AP31153 395 aaKnown RBP17.08■□□□□ 0.33
PHRF1-202ENST00000413872 RPL26P61254 145 aaKnown RBP17.08■□□□□ 0.33
PHRF1-202ENST00000413872 SLCO2A1Q92959 643 aa17.08■□□□□ 0.33
PHRF1-202ENST00000413872 SLC47A1Q96FL8 570 aa17.08■□□□□ 0.33
PHRF1-202ENST00000413872 HDHD2Q9H0R4 259 aa17.08■□□□□ 0.33
PHRF1-202ENST00000413872 RUVBL1Q9Y265 456 aaKnown RBP17.08■□□□□ 0.33
PHRF1-202ENST00000413872 UGT1A5P35504 534 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 PRR5P85299 388 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 COX10Q12887 443 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 SPANXN2Q5MJ10 180 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 OSTM1Q86WC4 334 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 OR2AG1Q9H205 316 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 VRTNQ9H8Y1 702 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 ENPP3O14638 875 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 CSNK2BP67870 215 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 FASTKD3Q14CZ7 662 aaKnown RBP17.08■□□□□ 0.32
PHRF1-202ENST00000413872 NRF1Q16656 503 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 C2orf27AQ580R0 203 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 PPM1JQ5JR12 505 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 GCNT6Q5T4J0 391 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 SH3PXD2AQ5TCZ1 1133 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 BROXQ5VW32 411 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 BNIPLQ7Z465 357 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 DCAF4L2Q8NA75 395 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 GLB1L3Q8NCI6 653 aaPredicted RBP17.08■□□□□ 0.32
PHRF1-202ENST00000413872 WDR55Q9H6Y2 383 aaPredicted RBP17.08■□□□□ 0.32
PHRF1-202ENST00000413872 HS3ST4Q9Y661 456 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 CCL22O00626 93 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 ADAMTS3O15072 1205 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 HLA-DQB2P05538 268 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 ALAS2P22557 587 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 TAS2R39P59534 338 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 ACTR3P61158 418 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 ZCCHC7Q8N3Z6 543 aaKnown RBP17.08■□□□□ 0.32
PHRF1-202ENST00000413872 SFRP1Q8N474 314 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 RBM18Q96H35 190 aaKnown RBP17.08■□□□□ 0.32
PHRF1-202ENST00000413872 BCAS3Q9H6U6 928 aa17.08■□□□□ 0.32
PHRF1-202ENST00000413872 PRR5-ARHGAP8B1AHC4 643 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 VIPR1P32241 457 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 AVPR1BP47901 424 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 DGKEP52429 567 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 ARHGAP8P85298 464 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 SLC1A5Q15758 541 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 ARSIQ5FYB1 569 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 MZT2AQ6P582 158 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 CRELD2Q6UXH1 353 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-202ENST00000413872 CLVS1Q8IUQ0 354 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-202ENST00000413872 ZNF671Q8TAW3 534 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 TRIB2Q92519 343 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 RIT1Q92963 219 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 PRDX6P30041 224 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 DPY19L1Q2PZI1 675 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 TMEM63BQ5T3F8 832 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 SIDT2Q8NBJ9 832 aaKnown RBP17.07■□□□□ 0.32
PHRF1-202ENST00000413872 NR2E1Q9Y466 385 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 TIMM22Q9Y584 194 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 H7C0S8 307 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 LAMP2P13473 410 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 FGFR3P22607 806 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 HNMTP50135 292 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 C2orf73Q8N5S3 287 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-202ENST00000413872 DNAJB8Q8NHS0 232 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 OSBPL11Q9BXB4 747 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 NECTIN3Q9NQS3 549 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 ABI3Q9P2A4 366 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 ADGRE2Q9UHX3 823 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 CCDC162PA2VCL2 907 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 SLC1A2P43004 574 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 XIAPP98170 497 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 ZNF155Q12901 538 aaPredicted RBP17.07■□□□□ 0.32
PHRF1-202ENST00000413872 PAFAH1B3Q15102 231 aaKnown RBP17.07■□□□□ 0.32
PHRF1-202ENST00000413872 POF1BQ8WVV4 589 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 MIEF2Q96C03 454 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 SMOQ99835 787 aa17.07■□□□□ 0.32
PHRF1-202ENST00000413872 N6AMT1Q9Y5N5 214 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms