RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	DUSP23	Q9BVJ7	150 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	CCDC68	Q9H2F9	335 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	LRRC4C	Q9HCJ2	640 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	RRAGD	Q9NQL2	400 aa	Predicted RBP	12.96	□□□□□ -0.33
SF1-206	ENST00000413725	UCKL1	Q9NWZ5	548 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	NSMCE4A	Q9NXX6	385 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	MOCS1	Q9NZB8	636 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	PCDHB1	Q9Y5F3	818 aa		12.96	□□□□□ -0.33
SF1-206	ENST00000413725	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	12.96	□□□□□ -0.33
SF1-206	ENST00000413725	TCRBV9S1A1T	A0A576	114 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725		H3BMM5	538 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	TPP1	O14773	563 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	POP7	O75817	140 aa	Known RBP	12.95	□□□□□ -0.34
SF1-206	ENST00000413725	ESR1	P03372	595 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	CELA2B	P08218	269 aa	Predicted RBP	12.95	□□□□□ -0.34
SF1-206	ENST00000413725	RPS3	P23396	243 aa	Known RBP eCLIP	12.95	□□□□□ -0.34
SF1-206	ENST00000413725	ACTR1B	P42025	376 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	ADAR	P55265	1226 aa	Known RBP	12.95	□□□□□ -0.34
SF1-206	ENST00000413725	GPX6	P59796	221 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	ACTR1A	P61163	376 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	KYNU	Q16719	465 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	TEDDM1	Q5T9Z0	273 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	PTRHD1	Q6GMV3	140 aa	Known RBP	12.95	□□□□□ -0.34
SF1-206	ENST00000413725	SLC30A9	Q6PML9	568 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	CYS1	Q717R9	158 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	GSPT2	Q8IYD1	628 aa	Known RBP	12.95	□□□□□ -0.34
SF1-206	ENST00000413725	SLC25A45	Q8N413	288 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	CLDN19	Q8N6F1	224 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	BEND7	Q8N7W2	519 aa	Predicted RBP	12.95	□□□□□ -0.34
SF1-206	ENST00000413725	PNPLA1	Q8N8W4	532 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	C2CD4A	Q8NCU7	369 aa	Predicted RBP	12.95	□□□□□ -0.34
SF1-206	ENST00000413725	LPGAT1	Q92604	370 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	CCDC97	Q96F63	343 aa	Predicted RBP	12.95	□□□□□ -0.34
SF1-206	ENST00000413725	LINC00615	Q96LM1	132 aa	Predicted RBP	12.95	□□□□□ -0.34
SF1-206	ENST00000413725	PANX3	Q96QZ0	392 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	CCM2	Q9BSQ5	444 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	CDC42EP4	Q9H3Q1	356 aa	Known RBP	12.95	□□□□□ -0.34
SF1-206	ENST00000413725	OSGEPL1	Q9H4B0	414 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	CAAP1	Q9H8G2	361 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	FBXO6	Q9NRD1	293 aa	Predicted RBP	12.95	□□□□□ -0.34
SF1-206	ENST00000413725	KLC4	Q9NSK0	619 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	NLGN3	Q9NZ94	848 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	NINJ2	Q9NZG7	142 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	KCNK6	Q9Y257	313 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	DNAJC16	Q9Y2G8	782 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	CRYL1	Q9Y2S2	319 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	PRSS21	Q9Y6M0	314 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	PCM1	Q15154	2024 aa		12.95	□□□□□ -0.34
SF1-206	ENST00000413725	MGAT4D	A6NG13	374 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	YY2	O15391	372 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	SGTA	O43765	313 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	S1PR4	O95977	384 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	TUBB	P07437	444 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	AK4	P27144	223 aa	Predicted RBP	12.94	□□□□□ -0.34
SF1-206	ENST00000413725	LEPR	P48357	1165 aa	Known RBP	12.94	□□□□□ -0.34
SF1-206	ENST00000413725	CLCNKA	P51800	687 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	VSNL1	P62760	191 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	MPP1	Q00013	466 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	DMPK	Q09013	629 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	DEFB133	Q30KQ1	61 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	WDR93	Q6P2C0	686 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	CCNI2	Q6ZMN8	369 aa	Predicted RBP	12.94	□□□□□ -0.34
SF1-206	ENST00000413725	DBX2	Q6ZNG2	339 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	TRMT10C	Q7L0Y3	403 aa	Known RBP	12.94	□□□□□ -0.34
SF1-206	ENST00000413725	C11orf96	Q7Z7L8	435 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	GALNT7	Q86SF2	657 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	SLC26A11	Q86WA9	606 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	FAM46D	Q8NEK8	389 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	OR2L2	Q8NH16	312 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	OR4C6	Q8NH72	309 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	CCL4L1	Q8NHW4	92 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	HM13	Q8TCT9	377 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	SETD7	Q8WTS6	366 aa	Known RBP	12.94	□□□□□ -0.34
SF1-206	ENST00000413725	NAT14	Q8WUY8	206 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	GLMN	Q92990	594 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	P2RY12	Q9H244	342 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	EVA1B	Q9NVM1	165 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	TAAR2	Q9P1P5	351 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	TXNDC16	Q9P2K2	825 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	PLEKHM1	Q9Y4G2	1056 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	COMMD10	Q9Y6G5	202 aa		12.94	□□□□□ -0.34
SF1-206	ENST00000413725	DMXL1	Q9Y485	3027 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	C17orf113	A0A1B0GUU1	675 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	ACSL3	O95573	720 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	FAM153B	P0C7A2	387 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	MYBL2	P10244	700 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	CD59	P13987	128 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	PKM	P14618	531 aa	Known RBP	12.93	□□□□□ -0.34
SF1-206	ENST00000413725	SLC2A4	P14672	509 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	IDS	P22304	550 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	FMO4	P31512	558 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	CD151	P48509	253 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	PMS2	P54278	862 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	ILF2	Q12905	390 aa	Known RBP	12.93	□□□□□ -0.34
SF1-206	ENST00000413725	NAB1	Q13506	487 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	FAM153C	Q494X1	144 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	C6orf132	Q5T0Z8	1188 aa		12.93	□□□□□ -0.34
SF1-206	ENST00000413725	ZCCHC8	Q6NZY4	707 aa	Known RBP	12.93	□□□□□ -0.34
SF1-206	ENST00000413725	ALYREF	Q86V81	257 aa	Known RBP	12.93	□□□□□ -0.34
SF1-206	ENST00000413725	NRROS	Q86YC3	692 aa		12.93	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms