RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 COL28A1Q2UY09 1125 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 CXorf66Q5JRM2 361 aaPredicted RBP5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 C9orf50Q5SZB4 431 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 ZNF648Q5T619 568 aaPredicted RBP5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 SERTAD4-AS1Q5TG53 156 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 CAPRIN2Q6IMN6 1127 aaKnown RBP5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 TMEM88Q6PEY1 159 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 PODNL1Q6PEZ8 512 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 ZBTB49Q6ZSB9 765 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 SEPT14Q6ZU15 432 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 CHSY3Q70JA7 882 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 PIGWQ7Z7B1 504 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 GPAT4Q86UL3 456 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 FAM228AQ86W67 206 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 NRROSQ86YC3 692 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 ARID3BQ8IVW6 561 aaPredicted RBP5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 LRRC56Q8IYG6 542 aaPredicted RBP5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 SYCE1Q8N0S2 351 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 CENPLQ8N0S6 344 aaPredicted RBP5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 AMER2Q8N7J2 671 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 FADS6Q8N9I5 356 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 Q8NA96 180 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 FLAD1Q8NFF5 587 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 OR52B4Q8NGK2 314 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 DDI1Q8WTU0 396 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 SYTL4Q96C24 671 aaPredicted RBP5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 NXNL1Q96CM4 212 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 AJUBAQ96IF1 538 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 LRRC3BQ96PB8 259 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 LRRC37BQ96QE4 947 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 GPA33Q99795 319 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 SPATC1LQ9H0A9 340 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 SLCO5A1Q9H2Y9 848 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 UBQLN3Q9H347 655 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 LMAN1LQ9HAT1 526 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 EPB41L5Q9HCM4 733 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 GPR108Q9NPR9 543 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 LZTFL1Q9NQ48 299 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 SLC22A11Q9NSA0 550 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 ETAA1Q9NY74 926 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 OR6C2Q9NZP2 312 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 SPATA7Q9P0W8 599 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 STOML1Q9UBI4 398 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 POLLQ9UGP5 575 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 STEAP1Q9UHE8 339 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 REREQ9P2R6 1566 aa5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 CDK13Q14004 1512 aaKnown RBP5.79□□□□□ -1.48
CBX1P3-201ENST00000413296 CAMSAP1Q5T5Y3 1602 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 FER1L4A9Z1Z3 1794 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 TRAV6A0A075B6T7 132 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 CYP3A7-CYP3A51PA0A087WV96 503 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 A0A0U1RQJ8 604 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 FAM237AA0A1B0GTK4 181 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 C3orf70A6NLC5 250 aaPredicted RBP5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 HRKO00198 91 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 LANCL1O43813 399 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 ADAM23O75077 832 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 NIPSNAP2O75323 286 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 MOSPD3O75425 235 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 PDE9AO76083 593 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 GNA14O95837 355 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 HEXAP06865 529 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 FHP07954 510 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 HOXB5P09067 269 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 ERVK-10P10266 1014 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 NCF2P19878 526 aaPredicted RBP5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 ATP6V1C1P21283 382 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 DRD4P21917 467 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 CYP3A7P24462 503 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 EPHA3P29320 983 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 AKT2P31751 481 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 GJC1P36383 396 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 ADCY8P40145 1251 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 KIR2DL1P43626 348 aaPredicted RBP5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 KIR2DL2P43627 348 aaPredicted RBP5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 CDKN1BP46527 198 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 SLC6A12P48065 614 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 SLC11A1P49279 550 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 NUCB2P80303 420 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 GPR162Q16538 588 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 SMN1Q16637 294 aaKnown RBP5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 TPD52L1Q16890 204 aaPredicted RBP5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 NKPD1Q17RQ9 610 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 GXYLT1Q4G148 440 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 FBXO43Q4G163 708 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 TMEM41BQ5BJD5 291 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 C10orf120Q5SQS8 335 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 LDLRAP1Q5SW96 308 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 TRAPPC3LQ5T215 181 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 SPOUT1Q5T280 376 aaKnown RBP5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 TMEM200BQ69YZ2 307 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 OR7E24Q6IFN5 339 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 DPP8Q6V1X1 898 aaPredicted RBP5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 SV2AQ7L0J3 742 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 DET1Q7L5Y6 550 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 OTOP2Q7RTS6 562 aa5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 EFL1Q7Z2Z2 1120 aaKnown RBP5.78□□□□□ -1.48
CBX1P3-201ENST00000413296 NKAIN4Q8IVV8 208 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms