RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 IGLV3-10A0A075B6K4 115 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 ANKDD1BA6NHY2 528 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 IDH3BO43837 385 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 MMP20O60882 483 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 ZNF217O75362 1048 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 RASGRP1O95267 797 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 TGDSO95455 350 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 ALPPL2P10696 532 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 TARSP26639 723 aaKnown RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 HOXD9P28356 352 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 GJA4P35212 333 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 EIF2DP41214 584 aaKnown RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 CST6Q15828 149 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 ATP6AP1LQ52LC2 224 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 NADSYN1Q6IA69 706 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 CD300LGQ6UXG3 332 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 LDB1Q86U70 411 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 CFAP206Q8IYR0 622 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 KIAA1958Q8N8K9 716 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 LSM14AQ8ND56 463 aaKnown RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 TNIP2Q8NFZ5 429 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 STARD8Q92502 1023 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 FATE1Q969F0 183 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 NCLNQ969V3 563 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 BTBD10Q9BSF8 475 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 CCDC134Q9H6E4 229 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 NUDT4Q9NZJ9 180 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 RIMKLBQ9ULI2 386 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 WBP11Q9Y2W2 641 aaKnown RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 CAPN8A6NHC0 703 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 CACNG3O60359 315 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 PIAS1O75925 651 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 AP2A2O94973 939 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 PRAMEF12O95522 483 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 KLKB1P03952 638 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 PRKCGP05129 697 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 NDUFS1P28331 727 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 RPL14P50914 215 aaKnown RBP8.42□□□□□ -1.06
SYNE1-211ENST00000413186 TAS2R39P59534 338 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 CYTH1Q15438 398 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 LACTB2Q53H82 288 aaPredicted RBP8.42□□□□□ -1.06
SYNE1-211ENST00000413186 LRRTM4Q86VH4 590 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 TXNDC5Q8NBS9 432 aaKnown RBP8.42□□□□□ -1.06
SYNE1-211ENST00000413186 BTN2A2Q8WVV5 523 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 CPEB1Q9BZB8 566 aaKnown RBP8.42□□□□□ -1.06
SYNE1-211ENST00000413186 OR2AG1Q9H205 316 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 TRIT1Q9H3H1 467 aaKnown RBP8.42□□□□□ -1.06
SYNE1-211ENST00000413186 CAB39LQ9H9S4 337 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 PCDH12Q9NPG4 1184 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 TCF7L2Q9NQB0 619 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 CA14Q9ULX7 337 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 TTC3P53804 2025 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 GNG14A0A1W2PPG7 69 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 E7ESA3 106 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 EDF1O60869 148 aaKnown RBP8.42□□□□□ -1.06
SYNE1-211ENST00000413186 SIN3BO75182 1162 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 GLDCP23378 1020 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 DNAJB1P25685 340 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 ANXA11P50995 505 aaKnown RBP8.42□□□□□ -1.06
SYNE1-211ENST00000413186 BTKQ06187 659 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 NIPAL4Q0D2K0 466 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 TRAF2Q12933 501 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 SEMA3BQ13214 749 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 CAPRIN1Q14444 709 aaKnown RBP8.42□□□□□ -1.06
SYNE1-211ENST00000413186 HSF5Q4G112 596 aaPredicted RBP8.42□□□□□ -1.06
SYNE1-211ENST00000413186 CYS1Q717R9 158 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 HID1Q8IV36 788 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 SCUBE1Q8IWY4 988 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 NRSN1Q8IZ57 195 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 DEFB123Q8N688 67 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 PIWIL2Q8TC59 973 aaKnown RBP8.42□□□□□ -1.06
SYNE1-211ENST00000413186 RMND5AQ9H871 391 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 PAPOLBQ9NRJ5 636 aaKnown RBP8.42□□□□□ -1.06
SYNE1-211ENST00000413186 HAO1Q9UJM8 370 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 YBX2Q9Y2T7 364 aaKnown RBP8.42□□□□□ -1.06
SYNE1-211ENST00000413186 PLLPQ9Y342 182 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 NUMBLQ9Y6R0 609 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 TCRBV21S2A2A0A5A6 115 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 EVPLLA8MZ36 301 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 UBDO15205 165 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 DYRK3O43781 588 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 UNC5CO95185 931 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 IGLV3-25P01717 112 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 PRKCHP24723 683 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 ARL3P36405 182 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 TNFRSF4P43489 277 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 KLC1Q07866 573 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 EMC10Q5UCC4 262 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 ZNF438Q7Z4V0 828 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 CAND1Q86VP6 1230 aaKnown RBP8.42□□□□□ -1.06
SYNE1-211ENST00000413186 ADGRG2Q8IZP9 1017 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 DNAJC9Q8WXX5 260 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 SORCS1Q8WY21 1168 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 SCRN2Q96FV2 425 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 RAB11FIP5Q9BXF6 653 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 ASPSCR1Q9BZE9 553 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 IL1RAPL1Q9NZN1 696 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.42□□□□□ -1.06
SYNE1-211ENST00000413186 SRCAPQ6ZRS2 3230 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 RLFQ13129 1914 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms