RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 NSFP46459 744 aaKnown RBP5.32□□□□□ -1.56
LINC00342-201ENST00000412393 CCR5P51681 352 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 NCALDP61601 193 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 SIM1P81133 766 aaPredicted RBP5.32□□□□□ -1.56
LINC00342-201ENST00000412393 PTP4A2Q12974 167 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 KCNAB2Q13303 367 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 RASA2Q15283 850 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 CYP1B1Q16678 543 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 SKIDA1Q1XH10 827 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 C15orf59Q2T9L4 293 aaPredicted RBP5.32□□□□□ -1.56
LINC00342-201ENST00000412393 HLA-BQ31612 363 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 ARL13BQ3SXY8 428 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 FAM46CQ5VWP2 391 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 STEAP3Q658P3 488 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 NCEH1Q6PIU2 408 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.32□□□□□ -1.56
LINC00342-201ENST00000412393 TAOK1Q7L7X3 1001 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 STRADAQ7RTN6 431 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 BNIPLQ7Z465 357 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 TFAP2DQ7Z6R9 452 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 SETD3Q86TU7 594 aaPredicted RBP5.32□□□□□ -1.56
LINC00342-201ENST00000412393 NT5DC3Q86UY8 548 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 LDLRAD3Q86YD5 345 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 NAXDQ8IW45 347 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 TRIM48Q8IWZ4 208 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 ZNF683Q8IZ20 524 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 AADATQ8N5Z0 425 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 DCAF4L2Q8NA75 395 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 ATP11CQ8NB49 1132 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 DRAXINQ8NBI3 349 aaPredicted RBP5.32□□□□□ -1.56
LINC00342-201ENST00000412393 NUDT10Q8NFP7 164 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 OR7D4Q8NG98 312 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 OR6P1Q8NGX9 317 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 OR14C36Q8NHC7 312 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 JOSD2Q8TAC2 188 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 AGAP11Q8TF27 550 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 FRS2Q8WU20 508 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 RXFP2Q8WXD0 754 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 TBC1D31Q96DN5 1066 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 DTNBP1Q96EV8 351 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 STAMBPL1Q96FJ0 436 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 NUDT11Q96G61 164 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 ZNF570Q96NI8 536 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 CAMK1GQ96NX5 476 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 SERPINB12Q96P63 405 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 LRRC37BQ96QE4 947 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 PCDHB18PQ96TA0 734 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 PSMB7Q99436 277 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 AGPAT1Q99943 283 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 ORAI3Q9BRQ5 295 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 ZYG11BQ9C0D3 744 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 IL21RQ9HBE5 538 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 TM7SF3Q9NS93 570 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 SEPT11Q9NVA2 429 aaKnown RBP5.32□□□□□ -1.56
LINC00342-201ENST00000412393 ADAM22Q9P0K1 906 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 SAMD15Q9P1V8 674 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 TMEFF2Q9UIK5 374 aaPredicted RBP5.32□□□□□ -1.56
LINC00342-201ENST00000412393 ANKRD6Q9Y2G4 727 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 ARL2BPQ9Y2Y0 163 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 UTP11Q9Y3A2 253 aaKnown RBP5.32□□□□□ -1.56
LINC00342-201ENST00000412393 SHROOM3Q8TF72 1996 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 KNTC1P50748 2209 aa5.32□□□□□ -1.56
LINC00342-201ENST00000412393 TBC1D3DA0A087WVF3 549 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 TBC1D3IA0A087WXS9 549 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 TBC1D3EA0A087X179 549 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 TBC1D3KA0A087X1G2 549 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 A0A0D9SEW6 157 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 ILVBLA1L0T0 632 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 TBC1D3FA6NER0 549 aaPredicted RBP5.31□□□□□ -1.56
LINC00342-201ENST00000412393 ZSCAN5CA6NGD5 496 aaPredicted RBP5.31□□□□□ -1.56
LINC00342-201ENST00000412393 C2CD4BA6NLJ0 364 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 MIF4GDA9UHW6 222 aaKnown RBP5.31□□□□□ -1.56
LINC00342-201ENST00000412393 TBC1D3LB9A6J9 549 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 KRIT1O00522 736 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 KCNK3O14649 394 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 ALOX15BO15296 676 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 SLC7A4O43246 635 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 DAPK3O43293 454 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 SMAD6O43541 496 aaKnown RBP5.31□□□□□ -1.56
LINC00342-201ENST00000412393 COQ9O75208 318 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 MTA2O94776 668 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 TRIM16O95361 564 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 MT-CO1P00395 513 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 CALB1P05937 261 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 LINGO3P0C6S8 592 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 TBC1D3HP0C7X1 549 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 PIM1P11309 404 aaPredicted RBP5.31□□□□□ -1.56
LINC00342-201ENST00000412393 KRT3P12035 628 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 CHN1P15882 459 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 ACADSP16219 412 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 ATP6V1C1P21283 382 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 GPD1P21695 349 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 ATP5DP30049 168 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 CHRNA3P32297 505 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 RFC1P35251 1148 aaPredicted RBP5.31□□□□□ -1.56
LINC00342-201ENST00000412393 ADRA1BP35368 520 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 DRD3P35462 400 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 MSH2P43246 934 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 MAGEA8P43361 318 aa5.31□□□□□ -1.56
LINC00342-201ENST00000412393 RECQLP46063 649 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms