RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-229	ENST00000411527	ACSS2	Q9NR19	701 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	FGF21	Q9NSA1	209 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	TMEM63C	Q9P1W3	806 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	FARSA	Q9Y285	508 aa	Known RBP	13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	MED13	Q9UHV7	2174 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	SPTBN1	Q01082	2364 aa	Known RBP	13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	UBA6	A0AVT1	1052 aa	Predicted RBP	13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	LRRD1	A4D1F6	860 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	PMPCB	O75439	489 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	POP7	O75817	140 aa	Known RBP	13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	HSD11B2	P80365	405 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	ZBED6	P86452	979 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	SPTAN1	Q13813	2472 aa	Known RBP	13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	PLCL1	Q15111	1095 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	PDK1	Q15118	436 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	B4GALNT4	Q76KP1	1039 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	SYVN1	Q86TM6	617 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	KMT5C	Q86Y97	462 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	SSC4D	Q8WTU2	575 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	MR1	Q95460	341 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	TEX15	Q9BXT5	2789 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	MAK16	Q9BXY0	300 aa	Known RBP	13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	ING2	Q9H160	280 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	UBP1	Q9NZI7	540 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	UVRAG	Q9P2Y5	699 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	CAPN11	Q9UMQ6	739 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	MAP4K5	Q9Y4K4	846 aa		13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.94	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	ESPL1	Q14674	2120 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	NBPF19	A0A087WUL8	3843 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	TLCD2	A6NGC4	264 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	APOL1	O14791	398 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	UGT1A9	O60656	530 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	CPNE3	O75131	537 aa	Known RBP	13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	SEMA7A	O75326	666 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	SCRG1	O75711	98 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	H2AFZ	P0C0S5	128 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	UGT1A6	P19224	532 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	UGT1A1	P22309	533 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	UGT1A4	P22310	534 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	HMGCL	P35914	325 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	PBX1	P40424	430 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	DMPK	Q09013	629 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	IL10RA	Q13651	578 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	SLC14A2	Q15849	920 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	SLC9A4	Q6AI14	798 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	TMEM220	Q6QAJ8	160 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	NPNT	Q6UXI9	565 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	H2AFV	Q71UI9	128 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	TMEM126B	Q8IUX1	230 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	TTC30B	Q8N4P2	665 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	RASGEF1A	Q8N9B8	481 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	PACSIN1	Q9BY11	444 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	UGT1A7	Q9HAW7	530 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	UGT1A10	Q9HAW8	530 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	UGT1A8	Q9HAW9	530 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	GLOD4	Q9HC38	313 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	MLXIPL	Q9NP71	852 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	IL26	Q9NPH9	171 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	KCND1	Q9NSA2	647 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	IMP3	Q9NV31	184 aa	Known RBP	13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	HRASLS2	Q9NWW9	162 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	LCMT1	Q9UIC8	334 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	LUC7L2	Q9Y383	392 aa	Known RBP	13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	SHANK1	Q9Y566	2161 aa		13.93	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527		A0A0A6YYK5	440 aa	Predicted RBP	13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	OR5K3	A6NET4	321 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	OR2AG2	A6NM03	316 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	PPP1R12A	O14974	1030 aa	Predicted RBP	13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	SORBS2	O94875	1100 aa	Known RBP	13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	PTGIR	P43119	386 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	CTSC	P53634	463 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	TUBB4B	P68371	445 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	FANCC	Q00597	558 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	GPS2	Q13227	327 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	LAMB3	Q13751	1172 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	TUBB2A	Q13885	445 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	NFE2L1	Q14494	772 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	MESD	Q14696	234 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	IQCB1	Q15051	598 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	NOMO1	Q15155	1222 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	GPR19	Q15760	415 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	CHRNA6	Q15825	494 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	TEX44	Q53QW1	395 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	PAPD7	Q5XG87	772 aa	Known RBP	13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	D2HGDH	Q8N465	521 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	SLC38A9	Q8NBW4	561 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	OLFM3	Q96PB7	478 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	CD180	Q99467	661 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	TUBB2B	Q9BVA1	445 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	ZCCHC2	Q9C0B9	1178 aa	Known RBP	13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	NENF	Q9UMX5	172 aa		13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	CFAP20	Q9Y6A4	193 aa	Known RBP	13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.92	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.91	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	C3orf70	A6NLC5	250 aa	Predicted RBP	13.91	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	ZNF487	B1APH4	448 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms