RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 RPE65Q16518 533 aa16.36■□□□□ 0.21
MRPL55-220ENST00000411464 H2AFVQ71UI9 128 aa16.36■□□□□ 0.21
MRPL55-220ENST00000411464 SPATA22Q8NHS9 363 aa16.36■□□□□ 0.21
MRPL55-220ENST00000411464 CTNNBL1Q8WYA6 563 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-220ENST00000411464 TADA1Q96BN2 335 aa16.36■□□□□ 0.21
MRPL55-220ENST00000411464 ZNF514Q96K75 400 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-220ENST00000411464 CD180Q99467 661 aa16.36■□□□□ 0.21
MRPL55-220ENST00000411464 MAP3K3Q99759 626 aa16.36■□□□□ 0.21
MRPL55-220ENST00000411464 ZCCHC2Q9C0B9 1178 aaKnown RBP16.36■□□□□ 0.21
MRPL55-220ENST00000411464 ING2Q9H160 280 aa16.36■□□□□ 0.21
MRPL55-220ENST00000411464 CAPN11Q9UMQ6 739 aa16.36■□□□□ 0.21
MRPL55-220ENST00000411464 PSMD13Q9UNM6 376 aa16.36■□□□□ 0.21
MRPL55-220ENST00000411464 FARSAQ9Y285 508 aaKnown RBP16.36■□□□□ 0.21
MRPL55-220ENST00000411464 PCDHGA9Q9Y5G4 932 aaKnown RBP16.36■□□□□ 0.21
MRPL55-220ENST00000411464 SPO11Q9Y5K1 396 aa16.36■□□□□ 0.21
MRPL55-220ENST00000411464 ARGFXA6NJG6 315 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 ZNF487B1APH4 448 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 APOL1O14791 398 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 CPNE3O75131 537 aaKnown RBP16.35■□□□□ 0.21
MRPL55-220ENST00000411464 PMPCBO75439 489 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 POP7O75817 140 aaKnown RBP16.35■□□□□ 0.21
MRPL55-220ENST00000411464 ZFXP17010 805 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-220ENST00000411464 HMGCLP35914 325 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 SLC14A2Q15849 920 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 NADK2Q4G0N4 442 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 DNTTIP2Q5QJE6 756 aaKnown RBP16.35■□□□□ 0.21
MRPL55-220ENST00000411464 ZDHHC20Q5W0Z9 365 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 SLC9A4Q6AI14 798 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 HIST2H2BCQ6DN03 193 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 TMEM126BQ8IUX1 230 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 SSC4DQ8WTU2 575 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 MR1Q95460 341 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 IQCDQ96DY2 449 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 GLOD4Q9HC38 313 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 IL26Q9NPH9 171 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 KCND1Q9NSA2 647 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 HRASLS2Q9NWW9 162 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.35■□□□□ 0.21
MRPL55-220ENST00000411464 TMEM63CQ9P1W3 806 aa16.35■□□□□ 0.21
MRPL55-220ENST00000411464 USP9XQ93008 2570 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-220ENST00000411464 A0A0A6YYK5 440 aaPredicted RBP16.34■□□□□ 0.21
MRPL55-220ENST00000411464 TLCD2A6NGC4 264 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 SCRG1O75711 98 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 KLK3P07288 261 aaPredicted RBP16.34■□□□□ 0.21
MRPL55-220ENST00000411464 TNNT3P45378 269 aaPredicted RBP16.34■□□□□ 0.21
MRPL55-220ENST00000411464 TPM4P67936 248 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 TUBB4BP68371 445 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 DMPKQ09013 629 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 CHAF1BQ13112 559 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 TUBB2AQ13885 445 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 MESDQ14696 234 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 TEX44Q53QW1 395 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 ODF2Q5BJF6 829 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 LDLRAP1Q5SW96 308 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 TMTC4Q5T4D3 741 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 CPZQ66K79 652 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 ARMC6Q6NXE6 501 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 D2HGDHQ8N465 521 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 TTC30BQ8N4P2 665 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 RASGEF1AQ8N9B8 481 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 GPR150Q8NGU9 434 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 OR8K5Q8NH50 307 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 TUBB2BQ9BVA1 445 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 TRABDQ9H4I3 376 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 MLXIPLQ9NP71 852 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 IMP3Q9NV31 184 aaKnown RBP16.34■□□□□ 0.21
MRPL55-220ENST00000411464 UBP1Q9NZI7 540 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 MAP4K5Q9Y4K4 846 aa16.34■□□□□ 0.21
MRPL55-220ENST00000411464 DNMT3AQ9Y6K1 912 aaPredicted RBP16.34■□□□□ 0.21
MRPL55-220ENST00000411464 NOTCH2Q04721 2471 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 OR5K3A6NET4 321 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 UGT1A9O60656 530 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 UGT1A6P19224 532 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 UGT1A1P22309 533 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 UGT1A4P22310 534 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 UBASH3AP57075 661 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 FANCCQ00597 558 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 XRCC4Q13426 336 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 IL10RAQ13651 578 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 IQCB1Q15051 598 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 CHRNA6Q15825 494 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 PPP2R5EQ16537 467 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 TMEM220Q6QAJ8 160 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 NPNTQ6UXI9 565 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 CERS6Q6ZMG9 384 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 B4GALNT4Q76KP1 1039 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 OOSP2Q86WS3 158 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 VSIG1Q86XK7 387 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 RFX6Q8HWS3 928 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 BEND7Q8N7W2 519 aaPredicted RBP16.33■□□□□ 0.2
MRPL55-220ENST00000411464 DTX3LQ8TDB6 740 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 OLFM3Q96PB7 478 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 UGT1A7Q9HAW7 530 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 UGT1A10Q9HAW8 530 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 UGT1A8Q9HAW9 530 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 CUEDC1Q9NWM3 386 aaPredicted RBP16.33■□□□□ 0.2
MRPL55-220ENST00000411464 G3BP2Q9UN86 482 aaKnown RBP16.33■□□□□ 0.2
MRPL55-220ENST00000411464 ZNF451Q9Y4E5 1061 aa16.33■□□□□ 0.2
MRPL55-220ENST00000411464 C3orf70A6NLC5 250 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-220ENST00000411464 OR2AG2A6NM03 316 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms