RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 RSRP1Q9BUV0 290 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 NUSAP1Q9BXS6 441 aaKnown RBP7.41□□□□□ -1.22
CXCR4-202ENST00000409817 BHLHE41Q9C0J9 482 aaPredicted RBP7.41□□□□□ -1.22
CXCR4-202ENST00000409817 EFCAB1Q9HAE3 211 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 BPIFA1Q9NP55 256 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 SPHK2Q9NRA0 654 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 PLK2Q9NYY3 685 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 STX18Q9P2W9 335 aaKnown RBP7.41□□□□□ -1.22
CXCR4-202ENST00000409817 SLC7A8Q9UHI5 535 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 BCAP29Q9UHQ4 241 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 PPM1HQ9ULR3 514 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 TNPO3Q9Y5L0 923 aaKnown RBP7.41□□□□□ -1.22
CXCR4-202ENST00000409817 A0A088AWK7 358 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 GLYATL1P3A0A0U1RQE8 302 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 SUPT3HB4E1H0 165 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 UBXN8O00124 270 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 EIF3FO00303 357 aaPredicted RBP7.41□□□□□ -1.22
CXCR4-202ENST00000409817 BTN3A1O00481 513 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 UBDO15205 165 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 ENTPD5O75356 428 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 MOSPD3O75425 235 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 SUPT3HO75486 399 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 GPC4O75487 556 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 ECI2O75521 394 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 PSMG1O95456 288 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 TSPAN12O95859 305 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 RPS17P08708 135 aaKnown RBP7.41□□□□□ -1.22
CXCR4-202ENST00000409817 PRSS56P0CW18 603 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 GJA1P17302 382 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 CTPS1P17812 591 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 GNAZP19086 355 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 ITPKAP23677 461 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 HNF1BP35680 557 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 RECQLP46063 649 aaPredicted RBP7.41□□□□□ -1.22
CXCR4-202ENST00000409817 ACADVLP49748 655 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 CLCN7P51798 805 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 ECT2LQ008S8 904 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 STX5Q13190 355 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 CUL3Q13618 768 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 CCDC85BQ15834 202 aaPredicted RBP7.41□□□□□ -1.22
CXCR4-202ENST00000409817 FUT11Q495W5 492 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 KHDC1Q4VXA5 237 aaKnown RBP7.41□□□□□ -1.22
CXCR4-202ENST00000409817 PRSS36Q5K4E3 855 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 DGKKQ5KSL6 1271 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 PTRHD1Q6GMV3 140 aaKnown RBP7.41□□□□□ -1.22
CXCR4-202ENST00000409817 METTL2BQ6P1Q9 378 aaKnown RBP7.41□□□□□ -1.22
CXCR4-202ENST00000409817 BRAT1Q6PJG6 821 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 MACC1Q6ZN28 852 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 KIAA0907Q7Z7F0 614 aaPredicted RBP7.41□□□□□ -1.22
CXCR4-202ENST00000409817 AHI1Q8N157 1196 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 POU5F2Q8N7G0 328 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 KYQ8NBH2 561 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 DTX3LQ8TDB6 740 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 MICAL1Q8TDZ2 1067 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 ULK4Q96C45 1275 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 EID2BQ96D98 161 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 LRIG1Q96JA1 1093 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 PLEKHG4BQ96PX9 1271 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 BBS2Q9BXC9 721 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 ASB8Q9H765 288 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 MRPL40Q9NQ50 206 aaKnown RBP7.41□□□□□ -1.22
CXCR4-202ENST00000409817 UTP6Q9NYH9 597 aaKnown RBP7.41□□□□□ -1.22
CXCR4-202ENST00000409817 NUDT4Q9NZJ9 180 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 CLEC4EQ9ULY5 219 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 SLC8A2Q9UPR5 921 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 C15orf41Q9Y2V0 281 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 L3MBTL1Q9Y468 752 aa7.41□□□□□ -1.22
CXCR4-202ENST00000409817 LOC100653049A0A140TA62 436 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 LINC01553A4QN01 128 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 J3QW42 95 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 AZIN1O14977 448 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 OR1I1O60431 355 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 SNX2O60749 519 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 CLASP2O75122 1294 aaKnown RBP7.4□□□□□ -1.23
CXCR4-202ENST00000409817 NIPSNAP2O75323 286 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 KRT34O76011 436 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 CDK14O94921 469 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 PAPLNO95428 1278 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 CHEK2O96017 543 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 ALPIP09923 528 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 TYRP14679 529 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 ZNF30P17039 623 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 BPIP17213 487 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 ITGAXP20702 1163 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 DGKAP23743 735 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 ACRV1P26436 265 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 NNMTP40261 264 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 NSG1P42857 185 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 CDKN1CP49918 316 aaPredicted RBP7.4□□□□□ -1.23
CXCR4-202ENST00000409817 MTTPP55157 894 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 AP2B1P63010 937 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 GPLD1P80108 840 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 SLC25A3Q00325 362 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 MLLT1Q03111 559 aaPredicted RBP7.4□□□□□ -1.23
CXCR4-202ENST00000409817 CLCQ05315 142 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 SLC34A1Q06495 639 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 GRIK2Q13002 908 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 LAPTM4AQ15012 233 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 E2F5Q15329 346 aa7.4□□□□□ -1.23
CXCR4-202ENST00000409817 TSNQ15631 228 aaKnown RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms