RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 NOL7Q9UMY1 257 aaKnown RBP4.4□□□□□ -1.71
CLK1-203ENST00000409769 GTF2A1LQ9UNN4 478 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 ASTN1O14525 1302 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 MYH9P35579 1960 aaKnown RBP4.4□□□□□ -1.71
CLK1-203ENST00000409769 LOXHD1Q8IVV2 1947 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 IGLV3-22A0A075B6J6 115 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 FAM237AA0A1B0GTK4 181 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 FAM86B1E9PN63 330 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 LAD1O00515 517 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 SLC37A4O43826 429 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 TDP2O95551 362 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 URODP06132 367 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 FAM86B2P0C5J1 330 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 GCFC2P16383 781 aaKnown RBP4.39□□□□□ -1.71
CLK1-203ENST00000409769 SRD5A1P18405 259 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 ARL1P40616 181 aaPredicted RBP4.39□□□□□ -1.71
CLK1-203ENST00000409769 PRPHP41219 470 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 CDH15P55291 814 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 CEBPZQ03701 1054 aaKnown RBP4.39□□□□□ -1.71
CLK1-203ENST00000409769 STK38Q15208 465 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 IL17AQ16552 155 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 NFIL3Q16649 462 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 DEFB115Q30KQ5 88 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 ADALQ6DHV7 355 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 SFTPA2Q8IWL1 248 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 CLIP4Q8N3C7 705 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 ANKRD13CQ8N6S4 541 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 FAM133AQ8N9E0 248 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 GPRC5AQ8NFJ5 357 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 KCNG4Q8TDN1 519 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 FAM216AQ8WUB2 273 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 HVCN1Q96D96 273 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 ZBTB10Q96DT7 871 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 CAPNS2Q96L46 248 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 TAAR1Q96RJ0 339 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 YME1L1Q96TA2 773 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 PORCNQ9H237 461 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 CLK4Q9HAZ1 481 aaKnown RBP4.39□□□□□ -1.71
CLK1-203ENST00000409769 KCNMB3Q9NPA1 279 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 PXMP2Q9NR77 195 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 IL1RAPL1Q9NZN1 696 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 KIAA1456Q9P272 454 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 PEMTQ9UBM1 199 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 FBXO2Q9UK22 296 aaPredicted RBP4.39□□□□□ -1.71
CLK1-203ENST00000409769 AGO1Q9UL18 857 aaKnown RBP4.39□□□□□ -1.71
CLK1-203ENST00000409769 PFASO15067 1338 aa4.39□□□□□ -1.71
CLK1-203ENST00000409769 A0A0U1RQF3 1178 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 A0A1B0GVM2 712 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 CYSRT1A8MQ03 144 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 PYGLP06737 847 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 HEXAP06865 529 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 HNRNPA1P09651 372 aaKnown RBP eCLIP4.38□□□□□ -1.71
CLK1-203ENST00000409769 OR52Z1P0C646 297 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 PCNAP12004 261 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 PTMSP20962 102 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 MARCKSP29966 332 aaPredicted RBP4.38□□□□□ -1.71
CLK1-203ENST00000409769 MAP2K2P36507 400 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 CXCR3P49682 368 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 NR1H2P55055 460 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 UBE2HP62256 183 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 CCNA1P78396 465 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 EFNB1P98172 346 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 GRB14Q14449 540 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 LETM2Q2VYF4 491 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 ZNF667Q5HYK9 610 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 EFHC1Q5JVL4 640 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 SERTAD4-AS1Q5TG53 156 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 RESP18Q5W5W9 173 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 TMEM81Q6P7N7 255 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 MOB3CQ70IA8 216 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 NIPA1Q7RTP0 329 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 GPR142Q7Z601 462 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 TADA2BQ86TJ2 420 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 TBC1D26Q86UD7 250 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 ETNPPLQ8TBG4 499 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 GPT2Q8TD30 523 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 ADAMTS14Q8WXS8 1223 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 IWS1Q96ST2 819 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 NAP1L4Q99733 375 aaKnown RBP4.38□□□□□ -1.71
CLK1-203ENST00000409769 GOLPH3LQ9H4A5 285 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 SLC32A1Q9H598 525 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 DDX25Q9UHL0 483 aaKnown RBP4.38□□□□□ -1.71
CLK1-203ENST00000409769 PCDHGB1Q9Y5G3 927 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 UBIAD1Q9Y5Z9 338 aa4.38□□□□□ -1.71
CLK1-203ENST00000409769 A0A1W2PQM1 296 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 MSH4O15457 936 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 ITM2AO43736 263 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 SLC25A17O43808 307 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 NEMFO60524 1076 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 LDB3O75112 727 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 PSMD10O75832 226 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 STAM2O75886 525 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 COX7A2P14406 83 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 SLC2A4P14672 509 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 ITGAXP20702 1163 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 CMA1P23946 247 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 CHATP28329 748 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 MAPK4P31152 587 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 ICAM3P32942 547 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 GABRB2P47870 512 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms