RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 UGT1A6P19224 532 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 UGT1A1P22309 533 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 UGT1A4P22310 534 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 CSF2RBP32927 897 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 UGT1A3P35503 534 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 MN1Q10571 1320 aaPredicted RBP14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 GPRC6AQ5T6X5 926 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 METRNLQ641Q3 311 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 TMEM220Q6QAJ8 160 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 FAM151BQ6UXP7 276 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 ARHGEF18Q6ZSZ5 1173 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 MGAQ8IWI9 3026 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 RASGEF1AQ8N9B8 481 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 ZDHHC12Q96GR4 267 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 LINC00615Q96LM1 132 aaPredicted RBP14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 EFHD1Q9BUP0 239 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 FICDQ9BVA6 458 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 UGT1A7Q9HAW7 530 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 UGT1A10Q9HAW8 530 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 UGT1A8Q9HAW9 530 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 DNAJC16Q9Y2G8 782 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 C17orf113A0A1B0GUU1 675 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 MGAT4DA6NG13 374 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 EFCAB7A8K855 629 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 ERI2A8K979 691 aaKnown RBP14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 CFAP99D6REC4 459 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 EFSO43281 561 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 MTX2O75431 263 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 PRAMEF1O95521 474 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 MAP4P27816 1152 aaKnown RBP14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 PSMB4P28070 264 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 KLF1Q13351 362 aaPredicted RBP14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 MSLNQ13421 630 aaPredicted RBP14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 LAMB3Q13751 1172 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 IL11RAQ14626 422 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 FAM182AQ5T1J6 154 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 LINC00523Q86TU6 105 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 BPHLQ86WA6 291 aaPredicted RBP14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 ZFAND4Q86XD8 727 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 BMPERQ8N8U9 685 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 OR4K2Q8NGD2 314 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 CCDC110Q8TBZ0 833 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 TTC9Q92623 222 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 ART4Q93070 314 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 DCUN1D1Q96GG9 259 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 C9orf72Q96LT7 481 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 TBL1YQ9BQ87 522 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 CCM2Q9BSQ5 444 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 ASB8Q9H765 288 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 LRRC40Q9H9A6 602 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 FOXJ2Q9P0K8 574 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 ARL5AQ9Y689 179 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 SCN8AQ9UQD0 1980 aa14.27□□□□□ -0.13
NIF3L1-205ENST00000409588 H7C0S8 307 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 GAPDHSO14556 408 aaPredicted RBP14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 POLR1CO15160 346 aaPredicted RBP14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 GSTM1P09488 218 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 BRAFP15056 766 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 MPSTP25325 297 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 RPL10P27635 214 aaKnown RBP14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 AKT1P31749 480 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 GSTM4Q03013 218 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 COL9A2Q14055 689 aaPredicted RBP14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 TGIF1Q15583 401 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 KHDC1Q4VXA5 237 aaKnown RBP14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 KCTD11Q693B1 232 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 SNX20Q7Z614 316 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 ZNF761Q86XN6 746 aaPredicted RBP14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 FAM129CQ86XR2 697 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 OR2L2Q8NH16 312 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 SLC35B2Q8TB61 432 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 NKD1Q969G9 470 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 GORASP1Q9BQQ3 440 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 TBC1D10AQ9BXI6 508 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 C10orf88Q9H8K7 445 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 OCIAD1Q9NX40 245 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 TMEM9Q9P0T7 183 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 SCHIP1Q9P0W5 487 aaPredicted RBP14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 B3GALT1Q9Y5Z6 326 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 COLEC10Q9Y6Z7 277 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 KALRNO60229 2985 aa14.26□□□□□ -0.13
NIF3L1-205ENST00000409588 A8MU76 341 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 DDX3YO15523 660 aaKnown RBP14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 ARHGAP6O43182 974 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 GAS8O95995 478 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 ITGALP20701 1170 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 NDUFS1P28331 727 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 MAPK9P45984 424 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 CAPZBP47756 277 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 XIAPP98170 497 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 MAP7Q14244 749 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 CLCA4Q14CN2 919 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 BCL7AQ4VC05 210 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 SNAP47Q5SQN1 464 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 DENND5AQ6IQ26 1287 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 ZNF449Q6P9G9 518 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 ZNF662Q6ZS27 426 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 CARFQ8N187 725 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 IL22RA1Q8N6P7 574 aa14.25□□□□□ -0.13
NIF3L1-205ENST00000409588 FAM71DQ8N9W8 422 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms