RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 PFKFB4Q16877 469 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 SLC44A4Q53GD3 710 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 UNC50Q53HI1 259 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 SEL1L3Q68CR1 1132 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 SBSNQ6UWP8 590 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 FRMD7Q6ZUT3 714 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 TMPRSS6Q8IU80 811 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 BEND7Q8N7W2 519 aaPredicted RBP13.85□□□□□ -0.19
GPNMB-203ENST00000409458 RASGEF1AQ8N9B8 481 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 AGR3Q8TD06 166 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 CCT6BQ92526 530 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 MSANTD3Q96H12 275 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 CNDP1Q96KN2 507 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 GSTO2Q9H4Y5 243 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 FBXL12Q9NXK8 326 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 KLHL42Q9P2K6 505 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 HAO1Q9UJM8 370 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 RAP2CQ9Y3L5 183 aa13.85□□□□□ -0.19
GPNMB-203ENST00000409458 CCDC189A1A4V9 331 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 LRRC14BA6NHZ5 514 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 NCF1BA6NI72 391 aaPredicted RBP13.84□□□□□ -0.19
GPNMB-203ENST00000409458 NCF1CA8MVU1 366 aaPredicted RBP13.84□□□□□ -0.19
GPNMB-203ENST00000409458 ZNF195O14628 629 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 PLRG1O43660 514 aaKnown RBP13.84□□□□□ -0.19
GPNMB-203ENST00000409458 KLK8O60259 260 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 TM7SF2O76062 418 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 PCDH8O95206 1070 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 SIX3O95343 332 aaPredicted RBP13.84□□□□□ -0.19
GPNMB-203ENST00000409458 NCF1P14598 390 aaPredicted RBP13.84□□□□□ -0.19
GPNMB-203ENST00000409458 ALOX15P16050 662 aaPredicted RBP13.84□□□□□ -0.19
GPNMB-203ENST00000409458 HERVK_113P63132 956 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 TMEM115Q12893 351 aaPredicted RBP13.84□□□□□ -0.19
GPNMB-203ENST00000409458 BOP1Q14137 746 aaKnown RBP13.84□□□□□ -0.19
GPNMB-203ENST00000409458 PPP1R3AQ16821 1122 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 SPRED3Q2MJR0 410 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 GPSM1Q86YR5 675 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 WDR75Q8IWA0 830 aaKnown RBP13.84□□□□□ -0.19
GPNMB-203ENST00000409458 FBXO39Q8N4B4 442 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 FITM2Q8N6M3 262 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 PLA2G15Q8NCC3 412 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 GANCQ8TET4 914 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 EBF4Q9BQW3 602 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 ERVK-6Q9BXR3 956 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 ZDHHC2Q9UIJ5 367 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 ADAMTS6Q9UKP5 1117 aa13.84□□□□□ -0.19
GPNMB-203ENST00000409458 ZFR2Q9UPR6 939 aaKnown RBP13.84□□□□□ -0.19
GPNMB-203ENST00000409458 SUPT7LO94864 414 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 FTH1P02794 183 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 PCCBP05166 539 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 CBSLP0DN79 551 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 CBSP35520 551 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 PRLHRP49683 370 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 PRKAA1Q13131 559 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 TGFBIQ15582 683 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 CRY1Q16526 586 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 FBXO43Q4G163 708 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 FBXO48Q5FWF7 155 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 PRPF38BQ5VTL8 546 aaKnown RBP13.83□□□□□ -0.2
GPNMB-203ENST00000409458 TMEM92Q6UXU6 159 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 CYHR1Q6ZMK1 362 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 CCDC121Q6ZUS5 278 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 FRA10AC1Q70Z53 315 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 RAB44Q7Z6P3 723 aaPredicted RBP13.83□□□□□ -0.2
GPNMB-203ENST00000409458 ADAMTSL2Q86TH1 951 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 NLRP8Q86W28 1048 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 VRK3Q8IV63 474 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 SIKE1Q9BRV8 207 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 ILKAPQ9H0C8 392 aaPredicted RBP13.83□□□□□ -0.2
GPNMB-203ENST00000409458 UTP6Q9NYH9 597 aaKnown RBP13.83□□□□□ -0.2
GPNMB-203ENST00000409458 NUDT4Q9NZJ9 180 aa13.83□□□□□ -0.2
GPNMB-203ENST00000409458 NDRG2Q9UN36 371 aaKnown RBP13.83□□□□□ -0.2
GPNMB-203ENST00000409458 TMEM202A6NGA9 273 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 LOC730098B7Z3J9 87 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 DCTN3O75935 186 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 KIAA0754O94854 1291 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 TSPAN8P19075 237 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 EEF1DP29692 281 aaKnown RBP13.82□□□□□ -0.2
GPNMB-203ENST00000409458 RPL14P50914 215 aaKnown RBP13.82□□□□□ -0.2
GPNMB-203ENST00000409458 ADPRHP54922 357 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 TFF2Q03403 129 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 CCDC15Q0P6D6 951 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 HSPA14Q0VDF9 509 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 FGL2Q14314 439 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 MLF2Q15773 248 aaPredicted RBP13.82□□□□□ -0.2
GPNMB-203ENST00000409458 WSCD2Q2TBF2 565 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 YTHDF3Q7Z739 585 aaKnown RBP13.82□□□□□ -0.2
GPNMB-203ENST00000409458 ADGRG6Q86SQ4 1221 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 ALYREFQ86V81 257 aaKnown RBP13.82□□□□□ -0.2
GPNMB-203ENST00000409458 DEFB123Q8N688 67 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 OR14C36Q8NHC7 312 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 ELMO1Q92556 727 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 SKA1Q96BD8 255 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 ERP27Q96DN0 273 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 NSUN5Q96P11 429 aaKnown RBP13.82□□□□□ -0.2
GPNMB-203ENST00000409458 LENG8Q96PV6 779 aaPredicted RBP13.82□□□□□ -0.2
GPNMB-203ENST00000409458 WWP1Q9H0M0 922 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 MYLK2Q9H1R3 596 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 TNFRSF12AQ9NP84 129 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 DNAJC28Q9NX36 388 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 CD274Q9NZQ7 290 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms