RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CDK4P11802 303 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 LEPRP48357 1165 aaKnown RBP13.23□□□□□ -0.29
COL6A2-204ENST00000409416 ZNF135P52742 658 aaPredicted RBP13.23□□□□□ -0.29
COL6A2-204ENST00000409416 IL2P60568 153 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 TRAF2Q12933 501 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 PTGR1Q14914 329 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 FAM45BPQ6NSW5 357 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 FAM171BQ6P995 826 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 CCDC81Q6ZN84 652 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 TSPAN33Q86UF1 283 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 SLC15A3Q8IY34 581 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 APCDD1Q8J025 514 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 FAM45AQ8TCE6 357 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 LINC01599Q8WXQ3 324 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 ADI1Q9BV57 179 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 TDRD1Q9BXT4 1180 aaKnown RBP13.23□□□□□ -0.29
COL6A2-204ENST00000409416 RERGLQ9H628 205 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 POLR1BQ9H9Y6 1135 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 WDR70Q9NW82 654 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 POLG2Q9UHN1 485 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 PER2O15055 1255 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 AP1G1O43747 822 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 TFPTP0C1Z6 253 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 HALP42357 657 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 PPP3CCP48454 512 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 TLE2Q04725 743 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 LARP4Q71RC2 724 aaKnown RBP eCLIP13.23□□□□□ -0.29
COL6A2-204ENST00000409416 BCL7CQ8WUZ0 217 aaPredicted RBP13.23□□□□□ -0.29
COL6A2-204ENST00000409416 PTCD2Q8WV60 388 aaKnown RBP13.23□□□□□ -0.29
COL6A2-204ENST00000409416 IMP4Q96G21 291 aaKnown RBP13.23□□□□□ -0.29
COL6A2-204ENST00000409416 RANBP9Q96S59 729 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 TRIM62Q9BVG3 475 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 FARSBQ9NSD9 589 aaKnown RBP13.23□□□□□ -0.29
COL6A2-204ENST00000409416 NEDD8-MDP1E9PL57 170 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 H3BNH8 94 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 ARPC2O15144 300 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 NOL3O60936 208 aaKnown RBP13.22□□□□□ -0.29
COL6A2-204ENST00000409416 SEC24AO95486 1093 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 B3GALT4O96024 378 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 C8BP07358 591 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 HSPA1AP0DMV8 641 aaKnown RBP13.22□□□□□ -0.29
COL6A2-204ENST00000409416 HSPA1BP0DMV9 641 aaKnown RBP13.22□□□□□ -0.29
COL6A2-204ENST00000409416 MADCAM1Q13477 382 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 LDLRAP1Q5SW96 308 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 ANKRD26P1Q6NSI1 321 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 DOK6Q6PKX4 331 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 NANOGNBQ7Z5D8 188 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 RBM12BQ8IXT5 1001 aaKnown RBP13.22□□□□□ -0.29
COL6A2-204ENST00000409416 CYB5D2Q8WUJ1 264 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.22□□□□□ -0.29
COL6A2-204ENST00000409416 ZNF597Q96LX8 424 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 OLAHQ9NV23 265 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 TMEM39AQ9NV64 488 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 MAP10Q9P2G4 905 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 OTOFQ9HC10 1997 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 CACNA1IQ9P0X4 2223 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 CCDC154A6NI56 674 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 RPP40O75818 363 aaKnown RBP13.22□□□□□ -0.29
COL6A2-204ENST00000409416 GALTP07902 379 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 GPX3P22352 226 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 RPL26P61254 145 aaKnown RBP13.22□□□□□ -0.29
COL6A2-204ENST00000409416 LIPEQ05469 1076 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 PIGFQ07326 219 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 CCDC92Q53HC0 331 aaPredicted RBP13.22□□□□□ -0.29
COL6A2-204ENST00000409416 ZNF549Q6P9A3 640 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 COLGALT2Q8IYK4 626 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 PHACTR4Q8IZ21 702 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 MDGA1Q8NFP4 955 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 RIN3Q8TB24 985 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 WFDC5Q8TCV5 224 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 LRRC58Q96CX6 371 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 INTS7Q9NVH2 962 aaKnown RBP13.22□□□□□ -0.29
COL6A2-204ENST00000409416 TMEM181Q9P2C4 612 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 LIMD1Q9UGP4 676 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 IKZF3Q9UKT9 509 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 TBC1D30Q9Y2I9 924 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 PRKAB1Q9Y478 270 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 SAP18O00422 153 aaKnown RBP13.22□□□□□ -0.29
COL6A2-204ENST00000409416 NOBOXO60393 691 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 ADAMTS4O75173 837 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 CD1DP15813 335 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 ATF6P18850 670 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 PRKACGP22612 351 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 ENTPD1P49961 510 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 ERMP1Q7Z2K6 904 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 CMTR2Q8IYT2 770 aaKnown RBP13.22□□□□□ -0.29
COL6A2-204ENST00000409416 SCAMP4Q969E2 229 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 SMAD5Q99717 465 aaKnown RBP13.22□□□□□ -0.29
COL6A2-204ENST00000409416 CSNK1G1Q9HCP0 422 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 CMTM6Q9NX76 183 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 ARL15Q9NXU5 204 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 SLCO3A1Q9UIG8 710 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 FADS3Q9Y5Q0 445 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 CACNA1CQ13936 2221 aa13.22□□□□□ -0.29
COL6A2-204ENST00000409416 SBF1O95248 1867 aa13.21□□□□□ -0.29
COL6A2-204ENST00000409416 SLC7A4O43246 635 aa13.21□□□□□ -0.29
COL6A2-204ENST00000409416 FKBP9O95302 570 aa13.21□□□□□ -0.29
COL6A2-204ENST00000409416 URODP06132 367 aa13.21□□□□□ -0.29
COL6A2-204ENST00000409416 HOXD8P13378 290 aaPredicted RBP13.21□□□□□ -0.29
COL6A2-204ENST00000409416 LPOP22079 712 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms