RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 ENTPD4Q9Y227 616 aa16.31■□□□□ 0.2
CHMP3-203ENST00000409225 COPG1Q9Y678 874 aaKnown RBP16.31■□□□□ 0.2
CHMP3-203ENST00000409225 ANKRD66B4E2M5 251 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 MEN1O00255 615 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 MATN3O15232 486 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 DDX3YO15523 660 aaKnown RBP16.3■□□□□ 0.2
CHMP3-203ENST00000409225 CCDC172P0C7W6 258 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 PIRTP0C851 137 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 VCLP18206 1134 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 GALNT3Q14435 633 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 LYPLAL1Q5VWZ2 237 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 TRAPPC5Q8IUR0 188 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 OR8K5Q8NH50 307 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 CPT1BQ92523 772 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 CLIP3Q96DZ5 547 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 LRFN5Q96NI6 719 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 SYT11Q9BT88 431 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 ZFYVE1Q9HBF4 777 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 HAUS2Q9NVX0 235 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 SOHLH2Q9NX45 425 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 MYO1AQ9UBC5 1043 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 SHOC2Q9UQ13 582 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 PCSK5Q92824 1860 aa16.3■□□□□ 0.2
CHMP3-203ENST00000409225 LRRTM2O43300 516 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 VEGFDO43915 354 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 CD86P42081 329 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 GLRBP48167 497 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 UBXN1Q04323 297 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 GALNT2Q10471 571 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 MMRN1Q13201 1228 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 BECN1Q14457 450 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 KRT81Q14533 505 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 RPE65Q16518 533 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 TMTC4Q5T4D3 741 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 HGSNATQ68CP4 663 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 SP5Q6BEB4 398 aaPredicted RBP16.29■□□□□ 0.2
CHMP3-203ENST00000409225 TIGD7Q6NT04 549 aaPredicted RBP16.29■□□□□ 0.2
CHMP3-203ENST00000409225 FBXO38Q6PIJ6 1188 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 FAM198BQ6UWH4 519 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 IRF2BP2Q7Z5L9 587 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 C11orf96Q7Z7L8 435 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 MCEMP1Q8IX19 187 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 INPP5DQ92835 1189 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 CD180Q99467 661 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 LATS2Q9NRM7 1088 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 HRASLS2Q9NWW9 162 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 PSMD13Q9UNM6 376 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 NTNG1Q9Y2I2 539 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 SCINQ9Y6U3 715 aa16.29■□□□□ 0.2
CHMP3-203ENST00000409225 APCP25054 2843 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 F8P00451 2351 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 OR5K3A6NET4 321 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 LCA5LO95447 670 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 ZBTB11O95625 1053 aaPredicted RBP16.28■□□□□ 0.2
CHMP3-203ENST00000409225 FTLP02792 175 aaPredicted RBP16.28■□□□□ 0.2
CHMP3-203ENST00000409225 CAPN1P07384 714 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 OTX2P32243 289 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 PER3P56645 1201 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 DCDC1P59894 354 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 ABRQ12979 859 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 CCDC122Q5T0U0 273 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 PDPK2PQ6A1A2 396 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 RAB43Q86YS6 212 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 ST6GALNAC3Q8NDV1 305 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 ENOX1Q8TC92 643 aaKnown RBP16.28■□□□□ 0.2
CHMP3-203ENST00000409225 UBE2Q2Q8WVN8 375 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 PPM1MQ96MI6 270 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 TLR10Q9BXR5 811 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 ADGRE3Q9BY15 652 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 AMACRQ9UHK6 382 aa16.28■□□□□ 0.2
CHMP3-203ENST00000409225 DIDO1Q9BTC0 2240 aaKnown RBP16.28■□□□□ 0.2
CHMP3-203ENST00000409225 AKAP9Q99996 3911 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 LGALS16A8MUM7 142 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 ALPPP05187 535 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 MMP2P08253 660 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 CD48P09326 243 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 CCNCP24863 283 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 CA5AP35218 305 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 RORAP35398 523 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 ARCN1P48444 511 aaKnown RBP16.27■□□□□ 0.2
CHMP3-203ENST00000409225 GTF2H3Q13889 308 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 ZRSR2Q15696 482 aaKnown RBP16.27■□□□□ 0.2
CHMP3-203ENST00000409225 IFI16Q16666 785 aaKnown RBP16.27■□□□□ 0.2
CHMP3-203ENST00000409225 PTCHD3Q3KNS1 767 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 CRB2Q5IJ48 1285 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 CT47A1Q5JQC4 288 aaPredicted RBP16.27■□□□□ 0.2
CHMP3-203ENST00000409225 ZC3H18Q86VM9 953 aaKnown RBP16.27■□□□□ 0.2
CHMP3-203ENST00000409225 SYTL1Q8IYJ3 562 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 GDAP1Q8TB36 358 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 TEKT4Q8WW24 435 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 FANCEQ9HB96 536 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 RAD18Q9NS91 495 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 IMP3Q9NV31 184 aaKnown RBP16.27■□□□□ 0.2
CHMP3-203ENST00000409225 PCMTD2Q9NV79 361 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 FANCLQ9NW38 375 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 TMPRSS11EQ9UL52 423 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 OSGIN2Q9Y236 505 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 PCDHGA10Q9Y5H3 936 aa16.27■□□□□ 0.2
CHMP3-203ENST00000409225 CFAP20Q9Y6A4 193 aaKnown RBP16.27■□□□□ 0.2
CHMP3-203ENST00000409225 PIKFYVEQ9Y2I7 2098 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms