RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 UPK3BL2E5RIL1 263 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 FFAR2O15552 330 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 XPAP23025 273 aaPredicted RBP24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 NRIP1P48552 1158 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 ST8SIA6P61647 398 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 PCBP2Q15366 365 aaKnown RBP eCLIP24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 PGAM4Q8N0Y7 254 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 TUBGCP3Q96CW5 907 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 NPAS2Q99743 824 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 WDR41Q9HAD4 459 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 CCDC167Q9P0B6 97 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 CD84Q9UIB8 345 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 CFLARO15519 480 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 FKBP6O75344 327 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 SORBS2O94875 1100 aaKnown RBP24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 SNRPB2P08579 225 aaKnown RBP24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 OR56A5P0C7T3 313 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 TIMP2P16035 220 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 LBPP18428 481 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 PKNOX1P55347 436 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 AP2B1P63010 937 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 MMEL1Q495T6 779 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 HMGCLL1Q8TB92 370 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 ZNF382Q96SR6 550 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 CDRT15Q96T59 188 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 MTG2Q9H4K7 406 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 PCDH12Q9NPG4 1184 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 KLHL42Q9P2K6 505 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 ANGPTL2Q9UKU9 493 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 POMPQ9Y244 141 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 ASB1Q9Y576 335 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 ANKRD12Q6UB98 2062 aa24.31■■□□□ 1.48
DNMT3A-206ENST00000406659 TSPAN11A1L157 253 aa24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 TBX10O75333 385 aa24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 ALDOCP09972 364 aaKnown RBP24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 CBSLP0DN79 551 aa24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 PRDX3P30048 256 aaKnown RBP24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 CBSP35520 551 aa24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 GCKP35557 465 aa24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 ERFP50548 548 aa24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 B4GALNT1Q00973 533 aa24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 KIF19Q2TAC6 998 aa24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 ZNF805Q5CZA5 627 aa24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 FAM78AQ5JUQ0 283 aa24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 TCHHL1Q5QJ38 904 aaPredicted RBP24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 PDPRQ8NCN5 879 aa24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 BPIFB1Q8TDL5 484 aa24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 NUP210Q8TEM1 1887 aaPredicted RBP24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 LRIG1Q96JA1 1093 aa24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 APOL5Q9BWW9 433 aa24.3■■□□□ 1.48
DNMT3A-206ENST00000406659 PRRC2BQ5JSZ5 2229 aaKnown RBP24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 IGLV3-16A0A075B6K0 115 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 GUCA1CO95843 209 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 GRB7Q14451 532 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 DUSP6Q16828 381 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 C18orf21Q32NC0 220 aaPredicted RBP24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 C12orf40Q86WS4 652 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 JADE3Q92613 823 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 EGFL8Q99944 293 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 SLC25A23Q9BV35 468 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 FAM83DQ9H4H8 585 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 SFXN1Q9H9B4 322 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 RAD18Q9NS91 495 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 POLG2Q9UHN1 485 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 ZNF225Q9UK10 706 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 ADAMTS6Q9UKP5 1117 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 SLC27A6Q9Y2P4 619 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 TULP3O75386 442 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 OR4F21O95013 312 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 NFATC1O95644 943 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 CTSLP07711 333 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 ACADVLP49748 655 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 AAGABQ6PD74 315 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 HSD11B1LQ7Z5J1 315 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 DCUN1D1Q96GG9 259 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 NOL11Q9H8H0 719 aaKnown RBP24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 ELOVL2Q9NXB9 296 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 DKK3Q9UBP4 350 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 GIMAP2Q9UG22 337 aa24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 PTBP2Q9UKA9 531 aaKnown RBP24.29■■□□□ 1.48
DNMT3A-206ENST00000406659 PLXNB3Q9ULL4 1909 aa24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 HGFP14210 728 aa24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 VCLP18206 1134 aa24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 GPX3P22352 226 aa24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 FSHRP23945 695 aa24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 AKT1P31749 480 aa24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 ARL1P40616 181 aaPredicted RBP24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 GTF2H2Q13888 395 aa24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 GTF2H2CQ6P1K8 395 aa24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 GOLGA7Q7Z5G4 137 aa24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 PHYKPLQ8IUZ5 450 aa24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 NPAS3Q8IXF0 933 aa24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 HCAR2Q8TDS4 363 aa24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 ANKRD27Q96NW4 1050 aa24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 NSUN3Q9H649 340 aaKnown RBP24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 TMPRSS11EQ9UL52 423 aa24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 YBX2Q9Y2T7 364 aaKnown RBP24.28■■□□□ 1.48
DNMT3A-206ENST00000406659 ANPEPP15144 967 aa24.27■■□□□ 1.48
DNMT3A-206ENST00000406659 VHLP40337 213 aa24.27■■□□□ 1.48
DNMT3A-206ENST00000406659 CCNIQ14094 377 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms