RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 DRG1Q9Y295 367 aaKnown RBP10.17□□□□□ -0.78
FAM49A-202ENST00000406434 JRKLQ9Y4A0 524 aa10.17□□□□□ -0.78
FAM49A-202ENST00000406434 LOXL2Q9Y4K0 774 aa10.17□□□□□ -0.78
FAM49A-202ENST00000406434 COL27A1Q8IZC6 1860 aaPredicted RBP10.17□□□□□ -0.78
FAM49A-202ENST00000406434 DSPP15924 2871 aaKnown RBP10.17□□□□□ -0.78
FAM49A-202ENST00000406434 PRAMEF33A0A0G2JMD5 474 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 A6NCN8 305 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 A8MU76 341 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 ZSCAN12O43309 604 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 APRTP07741 180 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 RALBP11234 206 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 TYRP1P17643 537 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 AMD1P17707 334 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 ITIH1P19827 911 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 ITPKBP27987 946 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 CCKBRP32239 447 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 SLC19A1P41440 591 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 GRIA1P42261 906 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 CDKN1CP49918 316 aaPredicted RBP10.16□□□□□ -0.78
FAM49A-202ENST00000406434 CFHR1Q03591 330 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 CDH17Q12864 832 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 NR1D2Q14995 579 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 TRIP13Q15645 432 aaPredicted RBP10.16□□□□□ -0.78
FAM49A-202ENST00000406434 SKIDA1Q1XH10 827 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 COL28A1Q2UY09 1125 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.16□□□□□ -0.78
FAM49A-202ENST00000406434 SNX20Q7Z614 316 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 C11orf96Q7Z7L8 435 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 REXO1L1PQ8IX06 675 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 ULK4Q96C45 1275 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 CXorf40BQ96DE9 158 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 CDKN2AIPNLQ96HQ2 116 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 CMKLR1Q99788 373 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.16□□□□□ -0.78
FAM49A-202ENST00000406434 KCNF1Q9H3M0 494 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 SARS2Q9NP81 518 aaKnown RBP10.16□□□□□ -0.78
FAM49A-202ENST00000406434 ASCL3Q9NQ33 180 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 NLE1Q9NVX2 485 aaPredicted RBP10.16□□□□□ -0.78
FAM49A-202ENST00000406434 TMEM9Q9P0T7 183 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 KLHL3Q9UH77 587 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 RALYQ9UKM9 306 aaKnown RBP10.16□□□□□ -0.78
FAM49A-202ENST00000406434 PSMD13Q9UNM6 376 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 ZKSCAN5Q9Y2L8 839 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 PCDHB3Q9Y5E6 796 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 PCDHGA8Q9Y5G5 932 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 FREM2Q5SZK8 3169 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 ZZEF1O43149 2961 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 WDFY3Q8IZQ1 3526 aa10.16□□□□□ -0.78
FAM49A-202ENST00000406434 IGHV5-10-1A0A0J9YXX1 117 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 OR52A4PA6NMU1 304 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 ERI2A8K979 691 aaKnown RBP10.15□□□□□ -0.78
FAM49A-202ENST00000406434 DUX1O43812 170 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 KCNJ13O60928 360 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 DXOO77932 396 aaKnown RBP10.15□□□□□ -0.78
FAM49A-202ENST00000406434 POLBP06746 335 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 PRSS56P0CW18 603 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 ATP1B2P14415 290 aaPredicted RBP10.15□□□□□ -0.78
FAM49A-202ENST00000406434 BRAFP15056 766 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 XRCC1P18887 633 aaPredicted RBP10.15□□□□□ -0.78
FAM49A-202ENST00000406434 HALP42357 657 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 LIMK2P53671 638 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 PCBP4P57723 403 aaKnown RBP10.15□□□□□ -0.78
FAM49A-202ENST00000406434 ERVPABLB-1P60509 514 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 GPLD1P80108 840 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 BASP1P80723 227 aaKnown RBP10.15□□□□□ -0.78
FAM49A-202ENST00000406434 EIF3IQ13347 325 aaKnown RBP10.15□□□□□ -0.78
FAM49A-202ENST00000406434 NFE2L1Q14494 772 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 CLCA4Q14CN2 919 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 C16orf72Q14CZ0 275 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 TMEM71Q6P5X7 295 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 ABRAXAS1Q6UWZ7 409 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 FAM83HQ6ZRV2 1179 aaPredicted RBP10.15□□□□□ -0.78
FAM49A-202ENST00000406434 SERPINA9Q86WD7 417 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 SLITRK4Q8IW52 837 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 CFAP206Q8IYR0 622 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 NXPE1Q8N323 547 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 SLC35F6Q8N357 371 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 ZNF248Q8NDW4 579 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 SNIP1Q8TAD8 396 aaKnown RBP10.15□□□□□ -0.78
FAM49A-202ENST00000406434 ZNF514Q96K75 400 aaPredicted RBP10.15□□□□□ -0.78
FAM49A-202ENST00000406434 PBKQ96KB5 322 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 CCDC74BQ96LY2 380 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 COPS8Q99627 209 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 AP1M1Q9BXS5 423 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 HOMER3Q9NSC5 361 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 ZNF624Q9P2J8 865 aaPredicted RBP10.15□□□□□ -0.78
FAM49A-202ENST00000406434 WDR37Q9Y2I8 494 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 DNMT3AQ9Y6K1 912 aaPredicted RBP10.15□□□□□ -0.78
FAM49A-202ENST00000406434 ADAMTS20P59510 1910 aa10.15□□□□□ -0.78
FAM49A-202ENST00000406434 A0A087WV48 116 aa10.14□□□□□ -0.79
FAM49A-202ENST00000406434 MGAT4DA6NG13 374 aa10.14□□□□□ -0.79
FAM49A-202ENST00000406434 OR51F1A6NGY5 319 aa10.14□□□□□ -0.79
FAM49A-202ENST00000406434 KLK10O43240 276 aa10.14□□□□□ -0.79
FAM49A-202ENST00000406434 KIF5CO60282 957 aa10.14□□□□□ -0.79
FAM49A-202ENST00000406434 SUN1O94901 812 aa10.14□□□□□ -0.79
FAM49A-202ENST00000406434 CCL4P13236 92 aa10.14□□□□□ -0.79
FAM49A-202ENST00000406434 ADRA1DP25100 572 aa10.14□□□□□ -0.79
FAM49A-202ENST00000406434 MSNP26038 577 aaKnown RBP10.14□□□□□ -0.79
FAM49A-202ENST00000406434 SLC5A2P31639 672 aa10.14□□□□□ -0.79
FAM49A-202ENST00000406434 CSF2RBP32927 897 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms