RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 WDR47O94967 919 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 CLDN7O95471 211 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 SPATA31D3P0C874 917 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 TCF3P15923 654 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 HOXA9P31269 272 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 CD70P32970 193 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 ERFP50548 548 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 VASPP50552 380 aaPredicted RBP17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 EMX2Q04743 252 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 MAD2L1Q13257 205 aaPredicted RBP17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 ATP6AP1LQ52LC2 224 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 SFT2D3Q587I9 215 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 CARD16Q5EG05 197 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 SPATA31D4Q6ZUB0 917 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 FAM192AQ9GZU8 254 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 SLC52A3Q9NQ40 469 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 HEBP1Q9NRV9 189 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 FAM234BA2RU67 622 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 WASH3PC4AMC7 463 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 NR5A2O00482 541 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 KPNA5O15131 536 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 SLC25A14O95258 325 aaPredicted RBP17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 LYNP07948 512 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 ENO2P09104 434 aaPredicted RBP17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 PTPN2P17706 415 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 AGTR2P50052 363 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 GTF2H2Q13888 395 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 GTF2H2CQ6P1K8 395 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 C22orf39Q6P5X5 142 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 CMTM8Q8IZV2 173 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 OR9I1Q8NGQ6 314 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 METTL6Q8TCB7 284 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 SPDL1Q96EA4 605 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 KCNA7Q96RP8 456 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 ARMC1Q9NVT9 282 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 DLGAP2Q9P1A6 1054 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 EIF2B4Q9UI10 523 aaKnown RBP17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 LEF1Q9UJU2 399 aaPredicted RBP17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 ZNF225Q9UK10 706 aa17.47■□□□□ 0.39
HLA-DQB1-204ENST00000399084 NCF1BA6NI72 391 aaPredicted RBP17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 NCF1CA8MVU1 366 aaPredicted RBP17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 KIF1CO43896 1103 aaKnown RBP17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 DNAJA2O60884 412 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 EEDO75530 441 aaKnown RBP17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 NCF1P14598 390 aaPredicted RBP17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 ZNF30P17039 623 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 SLC7A2P52569 658 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 CDKL1Q00532 357 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 PRKG2Q13237 762 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 CHRNA6Q15825 494 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 C6orf136Q5SQH8 315 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 CRTC1Q6UUV9 634 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 TCAIMQ8N3R3 496 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 MARVELD2Q8N4S9 558 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 UCMAQ8WVF2 138 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 LRRC58Q96CX6 371 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 PPP3R2Q96LZ3 170 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 CORO1BQ9BR76 489 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 EBF3Q9H4W6 596 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 C8orf4Q9NR00 106 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 FNDC3AQ9Y2H6 1198 aaKnown RBP17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 TIMM22Q9Y584 194 aa17.46■□□□□ 0.39
HLA-DQB1-204ENST00000399084 IGLV3-16A0A075B6K0 115 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 DPPA5A6NC42 116 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TRIM43BA6NCK2 446 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 LINC00271P0C7V0 271 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ERVPABLB-1P60509 514 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 LRRC26Q2I0M4 334 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 AASDHQ4L235 1098 aaPredicted RBP17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ELMSAN1Q6PJG2 1045 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 BRAT1Q6PJG6 821 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 GOLGA7Q7Z5G4 137 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TMCO2Q7Z6W1 182 aaPredicted RBP17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 RETREG3Q86VR2 466 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 RNF148Q8N7C7 305 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 MRPL43Q8N983 215 aaKnown RBP17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TMEM102Q8N9M5 508 aaPredicted RBP17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 KLHL23Q8NBE8 558 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 OR2T34Q8NGX1 318 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 OR2T3Q8NH03 318 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 HCAR2Q8TDS4 363 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 DIS3LQ8TF46 1054 aaKnown RBP17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ATP6V1E2Q96A05 226 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TRIM43Q96BQ3 446 aaPredicted RBP17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 DCUN1D1Q96GG9 259 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 MAGEB10Q96LZ2 347 aaPredicted RBP17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 COPS8Q99627 209 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 NTMT1Q9BV86 223 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 CD244Q9BZW8 370 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 NOL11Q9H8H0 719 aaKnown RBP17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ACTR3BQ9P1U1 418 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PACSIN3Q9UKS6 424 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 BTRCQ9Y297 605 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 BPTFQ12830 3046 aa17.45■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ARNTLO00327 626 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SLC28A1O00337 649 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 KATNA1O75449 491 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 OR4F21O95013 312 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 OR56A5P0C7T3 313 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 CAPN3P20807 821 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms