RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 EPB41L5Q9HCM4 733 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZDHHC3Q9NYG2 299 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 DKK4Q9UBT3 224 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 RAXQ9Y2V3 346 aa13.84□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ANKRD11Q6UB99 2663 aaPredicted RBP13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 IGLV3-16A0A075B6K0 115 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 GOLGA6L10A0A0M3HER8 536 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 OR5K4A6NMS3 321 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SRRM3A6NNA2 597 aaPredicted RBP13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 GOT2P00505 430 aaKnown RBP13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 RALBP11234 206 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TPSB2P20231 275 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 MPSTP25325 297 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 MGAT1P26572 445 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 FOXN2P32314 431 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CSF2RBP32927 897 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PPM1FP49593 454 aaPredicted RBP13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 INHBCP55103 352 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 ZFP36L1Q07352 338 aaKnown RBP13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 DMPKQ09013 629 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TPSAB1Q15661 275 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 DBN1Q16643 649 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 BCL7AQ4VC05 210 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PCID2Q5JVF3 399 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CREG2Q8IUH2 290 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SLITRK4Q8IW52 837 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PPHLN1Q8NEY8 458 aaKnown RBP13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 OR6P1Q8NGX9 317 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CPT1BQ92523 772 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TBC1D10AQ9BXI6 508 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TMEM9Q9P0T7 183 aa13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 DNMT3AQ9Y6K1 912 aaPredicted RBP13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 DSPP15924 2871 aaKnown RBP13.83□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 MGAT4DA6NG13 374 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CFAP99D6REC4 459 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 KCNJ13O60928 360 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TMEM63AO94886 807 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 VIPP01282 170 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 HGFP14210 728 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 LSSP48449 732 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 FNTAP49354 379 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PRLHRP49683 370 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CDK16Q00536 496 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 ACVR1Q04771 509 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PHF19Q5T6S3 580 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 AGAP9Q5VTM2 703 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 METRNLQ641Q3 311 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 LRRC8BQ6P9F7 803 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 WASH2PQ6VEQ5 465 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 RCBTB1Q8NDN9 531 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 OR2L2Q8NH16 312 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 GRAMD1AQ96CP6 724 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 LIN37Q96GY3 246 aaPredicted RBP13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PRR11Q96HE9 360 aaPredicted RBP13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TMEM74Q96NL1 305 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 IL22Q9GZX6 179 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 STN1Q9H668 368 aaKnown RBP13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 WASH6PQ9NQA3 447 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SYBUQ9NX95 663 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 BFARQ9NZS9 450 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 RIMKLBQ9ULI2 386 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CFAP20Q9Y6A4 193 aaKnown RBP13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SAR1BQ9Y6B6 198 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PRSS21Q9Y6M0 314 aa13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 KMT2BQ9UMN6 2715 aaPredicted RBP13.82□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CCDC187A0A096LP49 1063 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 IGHV5-10-1A0A0J9YXX1 117 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CTAGE9A4FU28 777 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 GOLGA8MH3BSY2 632 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 ZW10O43264 779 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TLX3O43711 291 aaPredicted RBP13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 OR1I1O60431 355 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 POLBP06746 335 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 NMBRP28336 390 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CCKBRP32239 447 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 MAGEA6P43360 314 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 MAPK9P45984 424 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 NPY2RP49146 381 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PRAMEP78395 509 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 GPLD1P80108 840 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 LAMB3Q13751 1172 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SEMA3AQ14563 771 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CES3Q6UWW8 571 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 NLRP9Q7RTR0 991 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CAND1Q86VP6 1230 aaKnown RBP13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TRIM48Q8IWZ4 208 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CFAP206Q8IYR0 622 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 OR4L1Q8NH43 312 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 OR10G6Q8NH81 332 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 WDR36Q8NI36 951 aaKnown RBP13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 NCSTNQ92542 709 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SH3KBP1Q96B97 665 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 AHCYL2Q96HN2 611 aaKnown RBP13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 LINC00615Q96LM1 132 aaPredicted RBP13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 ZMYND15Q9H091 742 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SLC40A1Q9NP59 571 aa13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 URB1O60287 2271 aaKnown RBP13.81□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PLD2O14939 933 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms