RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 USP45Q70EL2 814 aa18.12■□□□□ 0.49
MBD1-208ENST00000398493 SYT13Q7L8C5 426 aa18.12■□□□□ 0.49
MBD1-208ENST00000398493 SNX20Q7Z614 316 aa18.12■□□□□ 0.49
MBD1-208ENST00000398493 CUZD1Q86UP6 607 aa18.12■□□□□ 0.49
MBD1-208ENST00000398493 FBXL6Q8N531 539 aa18.12■□□□□ 0.49
MBD1-208ENST00000398493 CHST14Q8NCH0 376 aa18.12■□□□□ 0.49
MBD1-208ENST00000398493 RBM15BQ8NDT2 890 aaKnown RBP18.12■□□□□ 0.49
MBD1-208ENST00000398493 CEP70Q8NHQ1 597 aa18.12■□□□□ 0.49
MBD1-208ENST00000398493 ANKRD27Q96NW4 1050 aa18.12■□□□□ 0.49
MBD1-208ENST00000398493 OR52B2Q96RD2 323 aa18.12■□□□□ 0.49
MBD1-208ENST00000398493 WDR55Q9H6Y2 383 aaPredicted RBP18.12■□□□□ 0.49
MBD1-208ENST00000398493 THRAP10827 490 aa18.11■□□□□ 0.49
MBD1-208ENST00000398493 GFAPP14136 432 aa18.11■□□□□ 0.49
MBD1-208ENST00000398493 EPHA3P29320 983 aa18.11■□□□□ 0.49
MBD1-208ENST00000398493 RECQLP46063 649 aaPredicted RBP18.11■□□□□ 0.49
MBD1-208ENST00000398493 KLF10Q13118 480 aa18.11■□□□□ 0.49
MBD1-208ENST00000398493 PDCD2Q16342 344 aaPredicted RBP18.11■□□□□ 0.49
MBD1-208ENST00000398493 EOGTQ5NDL2 527 aa18.11■□□□□ 0.49
MBD1-208ENST00000398493 SDE2Q6IQ49 451 aa18.11■□□□□ 0.49
MBD1-208ENST00000398493 TRMT11Q7Z4G4 463 aaKnown RBP18.11■□□□□ 0.49
MBD1-208ENST00000398493 SPEM1Q8N4L4 309 aa18.11■□□□□ 0.49
MBD1-208ENST00000398493 PTGR2Q8N8N7 351 aaPredicted RBP18.11■□□□□ 0.49
MBD1-208ENST00000398493 EXT2Q93063 718 aa18.11■□□□□ 0.49
MBD1-208ENST00000398493 FAM136AQ96C01 138 aa18.11■□□□□ 0.49
MBD1-208ENST00000398493 LYSMD1Q96S90 227 aa18.11■□□□□ 0.49
MBD1-208ENST00000398493 ATOH8Q96SQ7 321 aa18.11■□□□□ 0.49
MBD1-208ENST00000398493 CLPBQ9H078 707 aa18.11■□□□□ 0.49
MBD1-208ENST00000398493 SLC6A17Q9H1V8 727 aa18.11■□□□□ 0.49
MBD1-208ENST00000398493 ASB8Q9H765 288 aa18.11■□□□□ 0.49
MBD1-208ENST00000398493 SLC8A2Q9UPR5 921 aa18.11■□□□□ 0.49
MBD1-208ENST00000398493 H3BMM5 538 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 OR1I1O60431 355 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 CLDN7O95471 211 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 POLR2LP62875 67 aaKnown RBP18.1■□□□□ 0.49
MBD1-208ENST00000398493 NAA25Q14CX7 972 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 OR4D1Q15615 310 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 GPR33Q49SQ1 333 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 UNC50Q53HI1 259 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 PLPP6Q8IY26 295 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 RBFAQ8N0V3 343 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 CPSF7Q8N684 471 aaKnown RBP18.1■□□□□ 0.49
MBD1-208ENST00000398493 SCRN2Q96FV2 425 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 FAM129BQ96TA1 746 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 MKRN2Q9H000 416 aaKnown RBP18.1■□□□□ 0.49
MBD1-208ENST00000398493 GSTO2Q9H4Y5 243 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 EBF2Q9HAK2 575 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 NOP53Q9NZM5 478 aaKnown RBP18.1■□□□□ 0.49
MBD1-208ENST00000398493 SUN2Q9UH99 717 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 MED16Q9Y2X0 877 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 PPIL1Q9Y3C6 166 aa18.1■□□□□ 0.49
MBD1-208ENST00000398493 EDDM13A0A1B0GTR0 161 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 SUPT3HB4E1H0 165 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 ATG13O75143 517 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 SUPT3HO75486 399 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 CIB2O75838 187 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 PRAMEF1O95521 474 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 CTSLP07711 333 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 RPS3P23396 243 aaKnown RBP eCLIP18.09■□□□□ 0.49
MBD1-208ENST00000398493 SPAM1P38567 509 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 RAP1GDS1P52306 607 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 CAMK2GQ13555 558 aaPredicted RBP18.09■□□□□ 0.49
MBD1-208ENST00000398493 PFKFB4Q16877 469 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 SETMARQ53H47 684 aaPredicted RBP18.09■□□□□ 0.49
MBD1-208ENST00000398493 CTSL3PQ5NE16 218 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 ZDHHC20Q5W0Z9 365 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 PTRHD1Q6GMV3 140 aaKnown RBP18.09■□□□□ 0.49
MBD1-208ENST00000398493 FAM151BQ6UXP7 276 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 SERPINA9Q86WD7 417 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 SCUBE1Q8IWY4 988 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 FBXO39Q8N4B4 442 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 EID2BQ96D98 161 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 PPP1R36Q96LQ0 422 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 P2RY12Q9H244 342 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 GNPTGQ9UJJ9 305 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 TRAF6Q9Y4K3 522 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 GLYATL1P3A0A0U1RQE8 302 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 A0A0U1RQS6 177 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 UBXN8O00124 270 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 SYNCRIPO60506 623 aaKnown RBP18.09■□□□□ 0.49
MBD1-208ENST00000398493 NIPSNAP2O75323 286 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 COX4I1P13073 169 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 CCNHP51946 323 aaPredicted RBP18.09■□□□□ 0.49
MBD1-208ENST00000398493 NFATC2Q13469 925 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 CDKN3Q16667 212 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 CACUL1Q86Y37 369 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 CLYBLQ8N0X4 340 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 SIDT2Q8NBJ9 832 aaKnown RBP18.09■□□□□ 0.49
MBD1-208ENST00000398493 ACTRT2Q8TDY3 377 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 AGAP11Q8TF27 550 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 ECHDC3Q96DC8 303 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 MAELQ96JY0 434 aaKnown RBP18.09■□□□□ 0.49
MBD1-208ENST00000398493 HHIPQ96QV1 700 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 DENND2DQ9H6A0 471 aaPredicted RBP18.09■□□□□ 0.49
MBD1-208ENST00000398493 ZDHHC6Q9H6R6 413 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 SARDHQ9UL12 918 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 DHRS7Q9Y394 339 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 CACNA1IQ9P0X4 2223 aa18.09■□□□□ 0.49
MBD1-208ENST00000398493 TCRBV21S2A2A0A5A6 115 aa18.08■□□□□ 0.48
MBD1-208ENST00000398493 RGSL1A5PLK6 1076 aa18.08■□□□□ 0.48
MBD1-208ENST00000398493 BTN3A1O00481 513 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms