RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 GPR150Q8NGU9 434 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 DTX3LQ8TDB6 740 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 CXorf40BQ96DE9 158 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 MAP3K3Q99759 626 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 XPO4Q9C0E2 1151 aaKnown RBP11.79□□□□□ -0.52
TFF3-202ENST00000398431 UGT1A7Q9HAW7 530 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 UGT1A10Q9HAW8 530 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 UGT1A8Q9HAW9 530 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 MLXIPLQ9NP71 852 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 IL26Q9NPH9 171 aa11.79□□□□□ -0.52
TFF3-202ENST00000398431 LUC7L2Q9Y383 392 aaKnown RBP11.79□□□□□ -0.52
TFF3-202ENST00000398431 SPTBP11277 2137 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 LOC285095A0A1B0GVY8 99 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 LRRD1A4D1F6 860 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 C21orf140B9A014 251 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 GPR39O43194 453 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 KCNJ13O60928 360 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 PMPCBO75439 489 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 POP7O75817 140 aaKnown RBP11.78□□□□□ -0.52
TFF3-202ENST00000398431 MT-ND3P03897 115 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 PTPN3P26045 913 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 CASP14P31944 242 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 CTSCP53634 463 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 RPS18P62269 152 aaKnown RBP11.78□□□□□ -0.52
TFF3-202ENST00000398431 TPM4P67936 248 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 MESDQ14696 234 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 NOMO1Q15155 1222 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 CHRNA6Q15825 494 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 SARM1Q6SZW1 724 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 KDELC1Q6UW63 502 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 ZNF517Q6ZMY9 492 aaPredicted RBP11.78□□□□□ -0.52
TFF3-202ENST00000398431 ATCAYQ86WG3 371 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 VSIG1Q86XK7 387 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 SIDT2Q8NBJ9 832 aaKnown RBP11.78□□□□□ -0.52
TFF3-202ENST00000398431 SLC38A9Q8NBW4 561 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 UBXN4Q92575 508 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 TEKT5Q96M29 485 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 ZNF830Q96NB3 372 aaPredicted RBP11.78□□□□□ -0.52
TFF3-202ENST00000398431 GPR87Q9BY21 358 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 ACTL8Q9H568 366 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 PDE7BQ9NP56 450 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 UBP1Q9NZI7 540 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 IL17CQ9P0M4 197 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 RARRES3Q9UL19 164 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 SHANK1Q9Y566 2161 aa11.78□□□□□ -0.52
TFF3-202ENST00000398431 SPTAN1Q13813 2472 aaKnown RBP11.77□□□□□ -0.53
TFF3-202ENST00000398431 GAPDHSO14556 408 aaPredicted RBP11.77□□□□□ -0.53
TFF3-202ENST00000398431 APOL1O14791 398 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 EBLN1P0CF75 366 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 GNLYP22749 145 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 PTPN4P29074 926 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 CHRNA4P43681 627 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 WASHC5Q12768 1159 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 TUBB3Q13509 450 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 NFE2L1Q14494 772 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 SLC18A3Q16572 532 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 UGT8Q16880 541 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 C4orf17Q53FE4 359 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 ZFYVE27Q5T4F4 411 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 CAPRIN2Q6IMN6 1127 aaKnown RBP11.77□□□□□ -0.53
TFF3-202ENST00000398431 TMEM220Q6QAJ8 160 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 AMZ2Q86W34 360 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 BPHLQ86WA6 291 aaPredicted RBP11.77□□□□□ -0.53
TFF3-202ENST00000398431 TRAPPC5Q8IUR0 188 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 D2HGDHQ8N465 521 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 SLC35G2Q8TBE7 412 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 BRSK1Q8TDC3 778 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 RNF25Q96BH1 459 aaPredicted RBP11.77□□□□□ -0.53
TFF3-202ENST00000398431 SRPK1Q96SB4 655 aaKnown RBP11.77□□□□□ -0.53
TFF3-202ENST00000398431 INSM2Q96T92 566 aaPredicted RBP11.77□□□□□ -0.53
TFF3-202ENST00000398431 LRRC4CQ9HCJ2 640 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 FGF21Q9NSA1 209 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 SAE1Q9UBE0 346 aaPredicted RBP11.77□□□□□ -0.53
TFF3-202ENST00000398431 PSMD13Q9UNM6 376 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 FARSAQ9Y285 508 aaKnown RBP11.77□□□□□ -0.53
TFF3-202ENST00000398431 DNMT3AQ9Y6K1 912 aaPredicted RBP11.77□□□□□ -0.53
TFF3-202ENST00000398431 SEC16AO15027 2179 aa11.77□□□□□ -0.53
TFF3-202ENST00000398431 SPTBN1Q01082 2364 aaKnown RBP11.76□□□□□ -0.53
TFF3-202ENST00000398431 EPOP01588 193 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 TMEM253P0C7T8 217 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 HALP42357 657 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 WNT3AP56704 352 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 ACY1Q03154 408 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 CHAF1BQ13112 559 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 GPS2Q13227 327 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 IL10RAQ13651 578 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 ESPL1Q14674 2120 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 PRKD1Q15139 912 aaPredicted RBP11.76□□□□□ -0.53
TFF3-202ENST00000398431 NADK2Q4G0N4 442 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 SIRPB2Q5JXA9 342 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 PAPD7Q5XG87 772 aaKnown RBP11.76□□□□□ -0.53
TFF3-202ENST00000398431 METRNLQ641Q3 311 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 CPZQ66K79 652 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 LCN10Q6JVE6 187 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 CCDC70Q6NSX1 233 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 MFSD7Q6UXD7 560 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 DDHD1Q8NEL9 900 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 GDAP1Q8TB36 358 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 ADAMTS17Q8TE56 1095 aa11.76□□□□□ -0.53
TFF3-202ENST00000398431 THAP4Q8WY91 577 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms