RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 STT3AP46977 705 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 CRHR2Q13324 411 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 CRY1Q16526 586 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 XKR4Q5GH76 650 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 KCTD8Q6ZWB6 473 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ADCK1Q86TW2 530 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 CMTR2Q8IYT2 770 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ARL14EPQ8N8R7 260 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 OR10Q1Q8NGQ4 319 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 NFKBIL1Q9UBC1 381 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 TDRKHQ9Y2W6 561 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 SH3BP1Q9Y3L3 701 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 A0A1W2PPW3 197 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 PRRG1O14668 218 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 KCNH1O95259 989 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ASLP04424 464 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 KRT8P05787 483 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ITPKAP23677 461 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 SYTL3Q4VX76 610 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 BHLHA9Q7RTU4 235 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 SCML4Q8N228 414 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 CHCHD4Q8N4Q1 142 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ROPN1LQ96C74 230 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 SLC47A1Q96FL8 570 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 CENPNQ96H22 339 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 DAPK2Q9UIK4 370 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 RNF11Q9Y3C5 154 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 AQP12BA6NM10 295 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 RGS14O43566 566 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 B4GALT3O60512 393 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 CYP11A1P05108 521 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ALDOCP09972 364 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 S100A3P33764 101 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 OR1D2P34982 312 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 CSKP41240 450 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 DCTN2Q13561 401 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 CPSF6Q16630 551 aaKnown RBP eCLIP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 RTP2Q5QGT7 225 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 RTN4RL1Q86UN2 441 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 SYT12Q8IV01 421 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 AQP12AQ8IXF9 295 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 C8orf59Q8N0T1 100 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 METTL25Q8N6Q8 603 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 DDHD1Q8NEL9 900 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 OR2T12Q8NG77 320 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 BRSK1Q8TDC3 778 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 USP7Q93009 1102 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 TMBIM1Q969X1 311 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 BBS2Q9BXC9 721 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ATG10Q9H0Y0 220 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ZNF696Q9H7X3 374 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 RMND5AQ9H871 391 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 PREBQ9HCU5 417 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 MRPL17Q9NRX2 175 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 PTTG2Q9NZH5 202 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 OPTCQ9UBM4 332 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 EBF1Q9UH73 591 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 LSM7Q9UK45 103 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 PRSS21Q9Y6M0 314 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 U3KQV3 271 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 MYH7BA7E2Y1 1941 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 PTGES3LE9PB15 166 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 H3BQ06 376 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 M0QZQ0 153 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 KDM1AO60341 852 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 OCM2P0CE71 109 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 OCMP0CE72 109 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 THRBP10828 461 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 G6PDP11413 515 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 DGKAP23743 735 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 SLC6A4P31645 630 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 HTR7P34969 479 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 CCT8P50990 548 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 BOP1Q14137 746 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 TAF1AQ15573 450 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 AASDHQ4L235 1098 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 GCNT7Q6ZNI0 430 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 KIAA0408Q6ZU52 694 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 GALNT5Q7Z7M9 940 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 TRPV3Q8NET8 790 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 OR13J1Q8NGT2 312 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 HMGCLL1Q8TB92 370 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 FAM81AQ8TBF8 368 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 GANCQ8TET4 914 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ZFAND2BQ8WV99 257 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 EZH1Q92800 747 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 GTPBP3Q969Y2 492 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 NUSAP1Q9BXS6 441 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 FAM126AQ9BYI3 521 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ZDHHC6Q9H6R6 413 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 MRM3Q9HC36 420 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 PNO1Q9NRX1 252 aaKnown RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 NUDT4Q9NZJ9 180 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 ORC6Q9Y5N6 252 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 N4BP2Q86UW6 1770 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-202ENST00000398417 KIAA1551Q9HCM1 1747 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 CDH23Q9H251 3354 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 C1orf232A0A0U1RR37 186 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 LOC730098B7Z3J9 87 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 GPR39O43194 453 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms