RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CAAP1Q9H8G2 361 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 TM7SF3Q9NS93 570 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 FETUBQ9UGM5 382 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 SLC24A2Q9UI40 661 aa23.24■■□□□ 1.31
TSPAN4-203ENST00000397397 RALGAPA1Q6GYQ0 2036 aa23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 FAM95CA0A1B0GW59 222 aa23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 NIPSNAP2O75323 286 aa23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 SYPP08247 313 aa23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 NME1P15531 152 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 GCAP28676 217 aa23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 LIMK2P53671 638 aa23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 OXR1Q8N573 874 aa23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 LKAAEAR1Q8TD35 194 aa23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 PANX3Q96QZ0 392 aa23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 DHRS4Q9BTZ2 278 aa23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 TMEM168Q9H0V1 697 aa23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 NCDNQ9UBB6 729 aa23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 APOBEC3BQ9UH17 382 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 MTO1Q9Y2Z2 717 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 DNMT3AQ9Y6K1 912 aaPredicted RBP23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 PIEZO1Q92508 2521 aa23.23■■□□□ 1.31
TSPAN4-203ENST00000397397 TDRD6O60522 2096 aaKnown RBP23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 E5RI56 91 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 H3BM21 787 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 ARHGAP33O14559 1287 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 ACP5P13686 325 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 CTSEP14091 401 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 CHRM3P20309 590 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 SERPINB9P50453 376 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 IRX4P78413 519 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 TCEA2Q15560 299 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 INSCQ1MX18 579 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 HECTD2Q5U5R9 776 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 FAM45BPQ6NSW5 357 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 IL27RAQ6UWB1 636 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 C11orf96Q7Z7L8 435 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 FAM45AQ8TCE6 357 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 FAM136AQ96C01 138 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 LINC00615Q96LM1 132 aaPredicted RBP23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 ZDHHC5Q9C0B5 715 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 PPCSQ9HAB8 311 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 SLC23A2Q9UGH3 650 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 ZNF180Q9UJW8 692 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 PLEKHM1Q9Y4G2 1056 aa23.22■■□□□ 1.31
TSPAN4-203ENST00000397397 PCDH15Q96QU1 1955 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 CACNA1EQ15878 2313 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 SMIM23A6NLE4 172 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 ITGA2BP08514 1039 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 SAT1P21673 171 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 HNRNPKP61978 463 aaKnown RBP eCLIP23.21■■□□□ 1.318e-6■■■■□ 19.7
TSPAN4-203ENST00000397397 ZNF423Q2M1K9 1284 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 HLA-BQ31612 363 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 TCEAL6Q6IPX3 200 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 ADGRD1Q6QNK2 874 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 TAOK1Q7L7X3 1001 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 AMZ2Q86W34 360 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 DCLK2Q8N568 766 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 ACVR1CQ8NER5 493 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 EPS8L3Q8TE67 593 aaKnown RBP23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 TCEAL3Q969E4 200 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 ELF4Q99607 663 aaPredicted RBP23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 GPR22Q99680 433 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 TIMM29Q9BSF4 260 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 SARS2Q9NP81 518 aaKnown RBP23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 TRNAU1APQ9NX07 287 aaKnown RBP23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 PSMC3IPQ9P2W1 217 aaPredicted RBP23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 FAM8A1Q9UBU6 413 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 VWA7Q9Y334 891 aa23.21■■□□□ 1.31
TSPAN4-203ENST00000397397 MGAT4DA6NG13 374 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 VPS26AO75436 327 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 TCEA3O75764 348 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 GSTM1P09488 218 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 SLCO1A2P46721 670 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 CDKN2DP55273 166 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 ARHGAP8P85298 464 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 GSTM4Q03013 218 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 BMPR2Q13873 1038 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 CASP8Q14790 479 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 PRRT3Q5FWE3 981 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 MROH9Q5TGP6 573 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 IQCKQ8N0W5 287 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 OR2L2Q8NH16 312 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 ELMO1Q92556 727 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 KCNJ9Q92806 393 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 KLC4Q9NSK0 619 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 SLC39A10Q9ULF5 831 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 KCNK6Q9Y257 313 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 DNAJC16Q9Y2G8 782 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 NFS1Q9Y697 457 aa23.2■■□□□ 1.3
TSPAN4-203ENST00000397397 TLDC2A0PJX2 215 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 RASGRF2O14827 1237 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 KRT38O76015 456 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 ENGP17813 658 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 VCLP18206 1134 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 ARRB1P49407 418 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 CTBSQ01459 385 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 C1orf61Q13536 156 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 LRP8Q14114 963 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 LGSNQ5TDP6 509 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 NAPRTQ6XQN6 538 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms