RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 KLC4Q9NSK0 619 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 ETNK2Q9NVF9 386 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 RPL26L1Q9UNX3 145 aaKnown RBP9.23□□□□□ -0.93
NEDD9-203ENST00000397378 PCDHGB6Q9Y5F9 930 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 GTF3C3Q9Y5Q9 886 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 MYO7BQ6PIF6 2116 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 IGHV5-51A0A0C4DH38 117 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 C1orf232A0A0U1RR37 186 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 TMEM191CA6NGB0 347 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 MTA2O94776 668 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 PRLP01236 227 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 JCHAINP01591 159 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 BRAFP15056 766 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 FOLR1P15328 257 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 CA4P22748 312 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 AMPD1P23109 780 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 ACY1Q03154 408 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 ATP1A4Q13733 1029 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 GPR18Q14330 331 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 IHHQ14623 411 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 FKBP15Q5T1M5 1219 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 AGAP9Q5VTM2 703 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 IZUMO3Q5VZ72 239 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 IRGCQ6NXR0 463 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 IGFL3Q6UXB1 125 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 FAM92BQ6ZTR7 304 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 POLNQ7Z5Q5 900 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 KMT5CQ86Y97 462 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 ENDOVQ8N8Q3 282 aaKnown RBP9.22□□□□□ -0.93
NEDD9-203ENST00000397378 FAR1Q8WVX9 515 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 RELTQ969Z4 430 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 CSPG4P5Q96PW8 444 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 TIMM29Q9BSF4 260 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 TDRD1Q9BXT4 1180 aaKnown RBP9.22□□□□□ -0.93
NEDD9-203ENST00000397378 OR2AG1Q9H205 316 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 MCCC2Q9HCC0 563 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 TRIM39Q9HCM9 518 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 FGF21Q9NSA1 209 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 PKD2L2Q9NZM6 624 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 SLC23A2Q9UGH3 650 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 AMACRQ9UHK6 382 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 CHKBQ9Y259 395 aa9.22□□□□□ -0.93
NEDD9-203ENST00000397378 NUP210LQ5VU65 1888 aa9.21□□□□□ -0.93
NEDD9-203ENST00000397378 TRGV8A0A0C4DH27 118 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 FAM221AA4D161 298 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 KMOO15229 486 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 CPNE3O75131 537 aaKnown RBP9.21□□□□□ -0.94
NEDD9-203ENST00000397378 JRKO75564 520 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 IPO13O94829 963 aaKnown RBP9.21□□□□□ -0.94
NEDD9-203ENST00000397378 SLC25A14O95258 325 aaPredicted RBP9.21□□□□□ -0.94
NEDD9-203ENST00000397378 TPM2P07951 284 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 RAB40ALP0C0E4 278 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 ZNF7P17097 686 aaPredicted RBP9.21□□□□□ -0.94
NEDD9-203ENST00000397378 KLK2P20151 261 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 CA5AP35218 305 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 PCK1P35558 622 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 UBE2HP62256 183 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 DSC2Q02487 901 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 ITKQ08881 620 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 MYBPC3Q14896 1274 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 KRT31Q15323 416 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 INSCQ1MX18 579 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 BOLA3Q53S33 107 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 TDRD12Q587J7 1177 aaKnown RBP9.21□□□□□ -0.94
NEDD9-203ENST00000397378 ANKRD20A8PQ5CZ79 823 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 DUS1LQ6P1R4 473 aaKnown RBP9.21□□□□□ -0.94
NEDD9-203ENST00000397378 ADGRG6Q86SQ4 1221 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 LRRTM4Q86VH4 590 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 TGIF2LYQ8IUE0 185 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 ZBTB2Q8N680 514 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 CLEC1AQ8NC01 280 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 NEK11Q8NG66 645 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 CCHCR1Q8TD31 782 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 MAML1Q92585 1016 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 ZNF514Q96K75 400 aaPredicted RBP9.21□□□□□ -0.94
NEDD9-203ENST00000397378 LRFN5Q96NI6 719 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 CD180Q99467 661 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 SYT11Q9BT88 431 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 MLPHQ9BV36 600 aaPredicted RBP9.21□□□□□ -0.94
NEDD9-203ENST00000397378 TRIM7Q9C029 511 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 CHST8Q9H2A9 424 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 PCDH9Q9HC56 1237 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 TAS2R14Q9NYV8 317 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 NFKBIL1Q9UBC1 381 aaPredicted RBP9.21□□□□□ -0.94
NEDD9-203ENST00000397378 TCFL5Q9UL49 500 aa9.21□□□□□ -0.94
NEDD9-203ENST00000397378 NOVA2Q9UNW9 492 aaKnown RBP9.21□□□□□ -0.94
NEDD9-203ENST00000397378 ZNF469Q96JG9 3925 aaPredicted RBP9.21□□□□□ -0.94
NEDD9-203ENST00000397378 A0A1W2PQJ5 194 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 OR52A4PA6NMU1 304 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 PDZK1P1A8MUH7 402 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 ANKRD66B4E2M5 251 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 C19orf84I3L1E1 186 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 CCL21O00585 134 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 ATMINO43313 823 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-203ENST00000397378 KLHL41O60662 606 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 KLK3P07288 261 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-203ENST00000397378 C8BP07358 591 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 CCDC172P0C7W6 258 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 EBLN1P0CF75 366 aa9.2□□□□□ -0.94
NEDD9-203ENST00000397378 RPL10P27635 214 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms