RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 MED13LQ71F56 2210 aa8.25□□□□□ -1.09
SCFD1-202ENST00000396629 VEGFDO43915 354 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 KLHL41O60662 606 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 CA4P22748 312 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 CA5AP35218 305 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 SERPINB6P35237 376 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 GLRBP48167 497 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 DCDC1P59894 354 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 NIPAL4Q0D2K0 466 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 RAPSNQ13702 412 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 MYBPC3Q14896 1274 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 ZXDCQ2QGD7 858 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-202ENST00000396629 PDPK2PQ6A1A2 396 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 C11orf96Q7Z7L8 435 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 CUZD1Q86UP6 607 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 RAB43Q86YS6 212 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 CARFQ8N187 725 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 TRAM1L1Q8N609 369 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 GPR26Q8NDV2 337 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 GPR150Q8NGU9 434 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 CPT1BQ92523 772 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 GLYATL1Q969I3 302 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 ZSCAN5AQ9BUG6 496 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 NUP85Q9BW27 656 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 TRIM7Q9C029 511 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 ZNF552Q9H707 407 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-202ENST00000396629 AGPAT4Q9NRZ5 378 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 TAS2R14Q9NYV8 317 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 AMACRQ9UHK6 382 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 BTRCQ9Y297 605 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 ADGRG4Q8IZF6 3080 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 CELSR1Q9NYQ6 3014 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 HIVEP1P15822 2718 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 UBA6A0AVT1 1052 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-202ENST00000396629 OR5K3A6NET4 321 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 ANKRD66B4E2M5 251 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 PRSS44E7EML9 344 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 F5H423 210 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-202ENST00000396629 E2F3O00716 465 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 ZG16O60844 167 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 KCNJ13O60928 360 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 ZBTB11O95625 1053 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-202ENST00000396629 IL1R2P27930 398 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 PCK1P35558 622 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 DRG2P55039 364 aaKnown RBP8.24□□□□□ -1.09
SCFD1-202ENST00000396629 BOLA3Q53S33 107 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 DNTTIP2Q5QJE6 756 aaKnown RBP8.24□□□□□ -1.09
SCFD1-202ENST00000396629 TMTC4Q5T4D3 741 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 PRAMEF17Q5VTA0 474 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 PPP1R2P3Q6NXS1 205 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 FATE1Q969F0 183 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 IP6K3Q96PC2 410 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 SYT11Q9BT88 431 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 PCMTD2Q9NV79 361 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 OSGIN2Q9Y236 505 aa8.24□□□□□ -1.09
SCFD1-202ENST00000396629 SEC16AO15027 2179 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 MATN3O15232 486 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 ATMINO43313 823 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-202ENST00000396629 IPO13O94829 963 aaKnown RBP8.23□□□□□ -1.09
SCFD1-202ENST00000396629 ALPPP05187 535 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 HADHAP40939 763 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 HALP42357 657 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 SOX8P57073 446 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 ABRQ12979 859 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 NCF4Q15080 339 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 PLCL1Q15111 1095 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 RPE65Q16518 533 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 KYNUQ16719 465 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 DPCR1Q3MIW9 517 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 KHDC1Q4VXA5 237 aaKnown RBP8.23□□□□□ -1.09
SCFD1-202ENST00000396629 SPOCD1Q6ZMY3 1216 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 SYTL1Q8IYJ3 562 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 ZADH2Q8N4Q0 377 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 LURAP1Q96LR2 239 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 FER1L6-AS2Q96M78 137 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 RAD18Q9NS91 495 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 RBM22Q9NW64 420 aaKnown RBP eCLIP8.23□□□□□ -1.092e-7■■■■□ 25.7
SCFD1-202ENST00000396629 TRIM10Q9UDY6 481 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 DOCK10Q96BY6 2186 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 ANKRD12Q6UB98 2062 aa8.23□□□□□ -1.09
SCFD1-202ENST00000396629 CDK14O94921 469 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 IGHEP01854 428 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 MMP2P08253 660 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 STSP08842 583 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 EDN3P14138 238 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 VCLP18206 1134 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 PTGER4P35408 488 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 ZNF165P49910 485 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 DMPKQ09013 629 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 GALNT2Q10471 571 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 ART3Q13508 389 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 SSPNQ14714 243 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 KRT31Q15323 416 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 LLGL1Q15334 1064 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 SMTNL2Q2TAL5 461 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 ANO6Q4KMQ2 910 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 ZNF789Q5FWF6 425 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 ALS2CLQ60I27 953 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 TMC3Q7Z5M5 1100 aa8.22□□□□□ -1.09
SCFD1-202ENST00000396629 MRGPREQ86SM8 312 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms