RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ERVK-11Q9UQG0 969 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 GPR45Q9Y5Y3 372 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 ANK1P16157 1881 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 A8MV72 311 aaPredicted RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 H3BRB1 525 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 CDC7O00311 574 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 SLC1A7O00341 560 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 UGT2B11O75310 529 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 RHOBTB1O94844 696 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 ANXA6P08133 673 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 FCGRTP55899 365 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 KCNC4Q03721 635 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 VAC14Q08AM6 782 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 SEMA3BQ13214 749 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 TUBA3CQ13748 450 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 FAM187BQ17R55 369 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 ZNF484Q5JVG2 852 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 UBE2UQ5VVX9 321 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 RSBN1Q5VWQ0 802 aaPredicted RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 SPATC1Q76KD6 591 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 TAS2R42Q7RTR8 314 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 CILP2Q8IUL8 1156 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 CALML6Q8TD86 181 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 FCRL5Q96RD9 977 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 HGH1Q9BTY7 390 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 TRMOQ9BU70 441 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 TP63Q9H3D4 680 aaPredicted RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 SMOC2Q9H3U7 446 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 DNMT3BQ9UBC3 853 aaKnown RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 SRRDQ9UH36 339 aa9.73□□□□□ -0.85
TRIM39-203ENST00000396547 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 CAB39Q9Y376 341 aaPredicted RBP9.73□□□□□ -0.85
TRIM39-203ENST00000396547 LOC100130705A0A1B0GUX0 176 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 PRKD3O94806 890 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 OR4F21O95013 312 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 DIRAS1O95057 198 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 STAU1O95793 577 aaKnown RBP9.72□□□□□ -0.85
TRIM39-203ENST00000396547 ANGPTL1O95841 491 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 S1PR4O95977 384 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 CHEK2O96017 543 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 JUNBP17275 347 aaPredicted RBP9.72□□□□□ -0.85
TRIM39-203ENST00000396547 ALOX12P18054 663 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 TGM1P22735 817 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 SERPINB10P48595 397 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 CLK1P49759 484 aaKnown RBP9.72□□□□□ -0.85
TRIM39-203ENST00000396547 NPTX1Q15818 432 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 KYAT1Q16773 422 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 RBM48Q5RL73 367 aaKnown RBP9.72□□□□□ -0.85
TRIM39-203ENST00000396547 GATAD2AQ86YP4 633 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 RIOX2Q8IUF8 465 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 OR13C4Q8NGS5 318 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 MCFD2Q8NI22 146 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 SOCS4Q8WXH5 440 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 SLC2A13Q96QE2 648 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 GAD1Q99259 594 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 ASPSCR1Q9BZE9 553 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 TXNRD2Q9NNW7 524 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 AMBNQ9NP70 447 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 AKIP1Q9NQ31 210 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 COMMD8Q9NX08 183 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 ANKMY1Q9P2S6 941 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 RBPJLQ9UBG7 517 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 ZMYM5Q9UJ78 669 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 TMEM98Q9Y2Y6 226 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 ARL5AQ9Y689 179 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 J3KR12 359 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 UPK1AO00322 258 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 ASNA1O43681 348 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 DFNA5O60443 496 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 MAFKO60675 156 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 UMPSP11172 480 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 CDH1P12830 882 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 CD1DP15813 335 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 ZNF37AP17032 561 aaPredicted RBP9.72□□□□□ -0.85
TRIM39-203ENST00000396547 ATP4BP51164 291 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 NEK2P51955 445 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 NKG7Q16617 165 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 AGAP7PQ5VUJ5 663 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 ANKS6Q68DC2 871 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 PAQR3Q6TCH7 311 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 ARMC8Q8IUR7 673 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 PHYKPLQ8IUZ5 450 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 PHACTR4Q8IZ21 702 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 TMEM199Q8N511 208 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 SCAMP5Q8TAC9 235 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 STON2Q8WXE9 905 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 HDAC2Q92769 488 aaKnown RBP9.72□□□□□ -0.85
TRIM39-203ENST00000396547 UBE2FQ969M7 185 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 PCED1BQ96HM7 432 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 ZNF560Q96MR9 790 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 PRM3Q9NNZ6 103 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 CRTAC1Q9NQ79 661 aa9.72□□□□□ -0.85
TRIM39-203ENST00000396547 HTTP42858 3142 aa9.71□□□□□ -0.85
TRIM39-203ENST00000396547 NPEPPSL1A6NEC2 478 aa9.71□□□□□ -0.85
TRIM39-203ENST00000396547 ARVCFO00192 962 aa9.71□□□□□ -0.85
TRIM39-203ENST00000396547 BTN3A1O00481 513 aa9.71□□□□□ -0.85
TRIM39-203ENST00000396547 PAGE1O75459 146 aa9.71□□□□□ -0.85
TRIM39-203ENST00000396547 ALOX5P09917 674 aa9.71□□□□□ -0.85
TRIM39-203ENST00000396547 RAP2AP10114 183 aa9.71□□□□□ -0.85
TRIM39-203ENST00000396547 SLC2A3P11169 496 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 678.2 ms