RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 IQCF5A8MTL0 148 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 MEI4A8MW99 385 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 M0R296 226 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 LAMTOR5O43504 91 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 PLIN3O60664 434 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 S100BP04271 92 aaPredicted RBP15.18■□□□□ 0.02
VAMP1-202ENST00000396308 TFEBP19484 476 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 PBLDP30039 288 aaPredicted RBP15.18■□□□□ 0.02
VAMP1-202ENST00000396308 TRIM23P36406 574 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 GLRBP48167 497 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 SERPINB4P48594 390 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 THOP1P52888 689 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 GYS2P54840 703 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 KIAA1024LP59773 190 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 GNGT1P63211 74 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 IRX4P78413 519 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 GUCY1A3Q02108 690 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 PLOD1Q02809 727 aaPredicted RBP15.18■□□□□ 0.02
VAMP1-202ENST00000396308 PPARDQ03181 441 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 NUMA1Q14980 2115 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 TMEM31Q5JXX7 168 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 TMEM220Q6QAJ8 160 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 FRA10AC1Q70Z53 315 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 ADGRG6Q86SQ4 1221 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 LRRTM4Q86VH4 590 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 LRRC8CQ8TDW0 803 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 SKA2Q8WVK7 121 aaPredicted RBP15.18■□□□□ 0.02
VAMP1-202ENST00000396308 FOXJ1Q92949 421 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 TMEM159Q96B96 161 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 NXNL1Q96CM4 212 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 CCDC126Q96EE4 140 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 UBXN10Q96LJ8 280 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 APOOQ9BUR5 198 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 C1QTNF1Q9BXJ1 281 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 C6orf106Q9H6K1 298 aaPredicted RBP15.18■□□□□ 0.02
VAMP1-202ENST00000396308 LATS2Q9NRM7 1088 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 C2orf42Q9NWW7 574 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 TMEM216Q9P0N5 145 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 ATXN10Q9UBB4 475 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 XPR1Q9UBH6 696 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 ADAM21Q9UKJ8 722 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 CNOT6Q9ULM6 557 aaKnown RBP15.18■□□□□ 0.02
VAMP1-202ENST00000396308 TMCO1Q9UM00 188 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 OR1A2Q9Y585 309 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 DOCK9Q9BZ29 2069 aa15.18■□□□□ 0.02
VAMP1-202ENST00000396308 LIN7AO14910 233 aaPredicted RBP15.17■□□□□ 0.02
VAMP1-202ENST00000396308 BIRC5O15392 142 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 SMIM24O75264 130 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 H2AFYO75367 372 aaKnown RBP15.17■□□□□ 0.02
VAMP1-202ENST00000396308 WISP3O95389 354 aaPredicted RBP15.17■□□□□ 0.02
VAMP1-202ENST00000396308 PROCP04070 461 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 HOXC4P09017 264 aaPredicted RBP15.17■□□□□ 0.02
VAMP1-202ENST00000396308 CPA3P15088 417 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 AOAHP28039 575 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 PLA2G5P39877 138 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 PXNP49023 591 aaPredicted RBP15.17■□□□□ 0.02
VAMP1-202ENST00000396308 YPEL5P62699 121 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 RPL6Q02878 288 aaKnown RBP15.17■□□□□ 0.02
VAMP1-202ENST00000396308 KHDC1Q4VXA5 237 aaKnown RBP15.17■□□□□ 0.02
VAMP1-202ENST00000396308 ZNF648Q5T619 568 aaPredicted RBP15.17■□□□□ 0.02
VAMP1-202ENST00000396308 C16orf46Q6P387 395 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 CRTC3Q6UUV7 619 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 CDHR3Q6ZTQ4 885 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 ADAMTSL2Q86TH1 951 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 NUDCD3Q8IVD9 361 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 PLD6Q8N2A8 252 aaKnown RBP15.17■□□□□ 0.02
VAMP1-202ENST00000396308 PELI3Q8N2H9 469 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 FSTL5Q8N475 847 aaPredicted RBP15.17■□□□□ 0.02
VAMP1-202ENST00000396308 CADM4Q8NFZ8 388 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 STAG3L4Q8TBR4 150 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 DENND1AQ8TEH3 1009 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 RLN3Q8WXF3 142 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 CCDC97Q96F63 343 aaPredicted RBP15.17■□□□□ 0.02
VAMP1-202ENST00000396308 TFB2MQ9H5Q4 396 aaKnown RBP15.17■□□□□ 0.02
VAMP1-202ENST00000396308 IGSF5Q9NSI5 407 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 RNF112Q9ULX5 631 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 MED16Q9Y2X0 877 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 NCOR1O75376 2440 aa15.17■□□□□ 0.02
VAMP1-202ENST00000396308 CCDC163A0A0D9SF12 145 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 BTN3A1O00481 513 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 KMOO15229 486 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 RAD51BO15315 384 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 TOP3BO95985 862 aaKnown RBP15.16■□□□□ 0.02
VAMP1-202ENST00000396308 CD1DP15813 335 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 ZNF8P17098 575 aaPredicted RBP15.16■□□□□ 0.02
VAMP1-202ENST00000396308 HOXA6P31267 233 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 ETV4P43268 484 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 RABIFP47224 123 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 PRKAA2P54646 552 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 HSPA14Q0VDF9 509 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 MPP2Q14168 576 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 PTK2BQ14289 1009 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 NFATC4Q14934 902 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 TECRLQ5HYJ1 363 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 ATG16L1Q676U5 607 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 RAB44Q7Z6P3 723 aaPredicted RBP15.16■□□□□ 0.02
VAMP1-202ENST00000396308 C11orf74Q86VG3 221 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 GIMAP7Q8NHV1 300 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 RHEBL1Q8TAI7 183 aa15.16■□□□□ 0.02
VAMP1-202ENST00000396308 RAB3IL1Q8TBN0 382 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms